Feature identity
- Identifier
- PaHa_c387g00130.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 726 bp
- Genomic location
- unplaced_contig_387:13,516–14,241
- Strand
- −
Hass · mRNA
PaHa_c387g00130.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 726
- bp
- unplaced_contig_387:13,516–14,241
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c387g00130
- eggNOG
- Preferred name: TAF3 | Seed ortholog: 1287680.R1GMG6 | COG: S | eggNOG OG: Bromo_TP@131567|A-1*, Bromo_TP@2759|Ad-7
- Gene Ontology
- GO:0000785 chromatin; GO:0003682 chromatin binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005669 transcription factor TFIID complex; GO:0005829 cytosol; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0008150 biological_process; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0045944 positive regulation of transcription by RNA polymerase II
- KEGG
- KO: K14650 | Pathway: 03022 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c387g00130.1-protein
derives_fromgenePaHa_c387g00130
CDS
part_ofPaHa_c387g00130.1-CDS-unplaced_contig_387-1787993825:13516..14241exon
part_ofPaHa_c387g00130.1-exon-unplaced_contig_387-1787993825:13516..14241