Feature identity
- Identifier
- PaHa01g39930.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,362 bp
- Genomic location
- 1:94,589,265–94,592,394
- Strand
- +
Hass · mRNA
PaHa01g39930.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,362
- bp
- 1:94,589,265–94,592,394
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g39930
- eggNOG
- Preferred name: FAD7 | Seed ortholog: 337451.A0A3S3P2B9 | COG: COG3239 | eggNOG OG: DUF3474@131567|C-2, DUF3474@3398|GM-13, FA_desaturase@131567|Bc-9, FA_desaturase@3398|DMZ-27!
- Gene Ontology
- GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009941 chloroplast envelope; GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; GO:0042170 plastid membrane; GO:0102993 sn-2 acyl-lipid omega-3 desaturase (ferredoxin) activity
- KEGG
- EC: ec:1.14.19.25, ec:1.14.19.35, ec:1.14.19.36 | KO: K10257 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g39930.1-protein
derives_frommRNAPaHa01g39930.1
mRNAPaHa01g39930.1
part_ofgenePaHa01g39930
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94589265..94589764mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94589851..94589940mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94590060..94590126mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94590232..94590324mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94590620..94590805mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94590944..94591024mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94591932..94592069mRNAPaHa01g39930.1
CDS
part_ofPaHa01g39930.1-CDS-1-1787993825:94592188..94592394mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94589265..94589764mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94589851..94589940mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94590060..94590126mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94590232..94590324mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94590620..94590805mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94590944..94591024mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94591932..94592069mRNAPaHa01g39930.1
exon
part_ofPaHa01g39930.1-exon-1-1787993825:94592188..94592394mRNAPaHa01g39930.1
