Feature identity
- Identifier
- PaHa_c340g00140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,287 bp
- Genomic location
- unplaced_contig_340:15,024–16,833
- Strand
- −
Hass · mRNA
PaHa_c340g00140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,287
- bp
- unplaced_contig_340:15,024–16,833
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c340g00140
- eggNOG
- Preferred name: Acadsb | Seed ortholog: 1168221.R7YYW9 | COG: COG1960 | eggNOG OG: Acyl-CoA_dh_1@131567|wY-17!, Acyl-CoA_dh_M@131567|Me-13, Acyl-CoA_dh_N@131567|BIX-18
- Gene Ontology
- GO:0005739 mitochondrion; GO:0016937 short-chain fatty acyl-CoA dehydrogenase activity; GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase
- KEGG
- EC: ec:1.3.8.5 | KO: K09478 | Pathway: 00071, 00280, 01100, 01110, 01212 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c340g00140.1-protein
derives_fromgenePaHa_c340g00140
CDS
part_ofPaHa_c340g00140.1-CDS-unplaced_contig_340-1787993825:15024..15409CDS
part_ofPaHa_c340g00140.1-CDS-unplaced_contig_340-1787993825:15509..15743CDS
part_ofPaHa_c340g00140.1-CDS-unplaced_contig_340-1787993825:15795..16432CDS
part_ofPaHa_c340g00140.1-CDS-unplaced_contig_340-1787993825:16806..16833exon
part_ofPaHa_c340g00140.1-exon-unplaced_contig_340-1787993825:15024..15409exon
part_ofPaHa_c340g00140.1-exon-unplaced_contig_340-1787993825:15509..15743exon
part_ofPaHa_c340g00140.1-exon-unplaced_contig_340-1787993825:15795..16432exon
part_ofPaHa_c340g00140.1-exon-unplaced_contig_340-1787993825:16806..16833