Feature identity
- Identifier
- PaHa01g39540.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,071 bp
- Genomic location
- 1:94,075,100–94,077,248
- Strand
- +
Hass · mRNA
PaHa01g39540.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,071
- bp
- 1:94,075,100–94,077,248
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g39540
- eggNOG
- Preferred name: ANS | Seed ortholog: 337451.A0A443NS82 | COG: COG3491 | eggNOG OG: 2OG-FeII_Oxy@131567|C-2!, 2OG-FeII_Oxy@3193|ANy-21, 2OG-FeII_Oxy@3398|Avi-23, 2OG-FeII_Oxy@35493|Fn-12, 2OG-FeII_Oxy@58023|Adf-22, DIOX_N@2759|B-2!, DIOX_N@3193|GH-11, DIOX_N@3398|Np-13, DIOX_N@58023|JL-12
- Gene Ontology
- GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0050498 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated; GO:0050589 leucocyanidin oxygenase activity
- KEGG
- EC: ec:1.14.20.4 | KO: K05277 | Pathway: 00941, 01100, 01110 | Module: M00138 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g39540.1-protein
derives_frommRNAPaHa01g39540.1
mRNAPaHa01g39540.1
part_ofgenePaHa01g39540
CDS
part_ofPaHa01g39540.1-CDS-1-1787993825:94075100..94075602mRNAPaHa01g39540.1
CDS
part_ofPaHa01g39540.1-CDS-1-1787993825:94076681..94077248mRNAPaHa01g39540.1
exon
part_ofPaHa01g39540.1-exon-1-1787993825:94075100..94075602mRNAPaHa01g39540.1
exon
part_ofPaHa01g39540.1-exon-1-1787993825:94076681..94077248mRNAPaHa01g39540.1
