Chr02.g13850.m1

Functional evidence

Functional index matched identifier: Chr02.g13850

eggNOG

4432.XP_010262342.1,K,[lysine-specific demethylase]

Gene Ontology

lysine-specific demethylase | GO:0000003//reproduction; GO:0003006//developmental process involved in reproduction; GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006325//chromatin organization; GO:0006355//regulation of transcription, DNA-templated; GO:0006464//cellular protein modification process; GO:0006479//protein methylation; GO:0006482//protein demethylation; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008213//protein alkylation; GO:0008214//protein dealkylation; GO:0009314//response to radiation; GO:0009416//response to light stimulus; GO:0009628//response to abiotic stimulus; GO:0009648//photoperiodism; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009909//regulation of flower development; GO:0009910//negative regulation of flower development; GO:0009987//cellular process; GO:0010216//maintenance of DNA methylation; GO:0010228//vegetative to reproductive phase transition of meristem; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0016043//cellular component organization; GO:0016569//covalent chromatin modification; GO:0016570//histone modification; GO:0016571//histone methylation; GO:0016577//histone demethylation; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0022414//reproductive process; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0032259//methylation; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0034641//cellular nitrogen compound metabolic process; GO:0034720//histone H3-K4 demethylation; GO:0036211//protein modification process; GO:0040008//regulation of growth; GO:0040009//regulation of growth rate; GO:0040010//positive regulation of growth rate; GO:0040029//regulation of gene expression, epigenetic; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043414//macromolecule methylation; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0045814//negative regulation of gene expression, epigenetic; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045927//positive regulation of growth; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0046483//heterocycle metabolic process; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048573//photoperiodism, flowering; GO:0048579//negative regulation of long-day photoperiodism, flowering; GO:0048580//regulation of post-embryonic development; GO:0048581//negative regulation of post-embryonic development; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0048586//regulation of long-day photoperiodism, flowering; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048831//regulation of shoot system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051093//negative regulation of developmental process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051241//negative regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051276//chromosome organization; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0070076//histone lysine demethylation; GO:0070988//demethylation; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0090304//nucleic acid metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:2000026//regulation of multicellular organismal development; GO:2000028//regulation of photoperiodism, flowering; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2000241//regulation of reproductive process; GO:2000242//negative regulation of reproductive process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0000976//transcription regulatory region sequence-specific DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0003824//catalytic activity; GO:0005488//binding; GO:0005506//iron ion binding; GO:0008168//methyltransferase activity; GO:0008198//ferrous iron binding; GO:0008276//protein methyltransferase activity; GO:0016740//transferase activity; GO:0016741//transferase activity, transferring one-carbon groups; GO:0032451//demethylase activity; GO:0032452//histone demethylase activity; GO:0032453//histone demethylase activity (H3-K4 specific); GO:0042054//histone methyltransferase activity; GO:0043167//ion binding; GO:0043169//cation binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0046872//metal ion binding; GO:0046914//transition metal ion binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding

KEGG

K11446 | KDM5, JARID1

NR

RWR73204.1 lysine-specific demethylase JMJ18 [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

C0SUT9.1 RecName: Full=Putative lysine-specific demethylase JMJ16; AltName: Full=Jumonji domain-containing protein 16; AltName: Full=Lysine-specific histone demethylase JMJ16; AltName: Full=Protein JUMONJI 16 [Arabidopsis thaliana]