Feature identity
- Identifier
- PaHa_c298g00160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 408 bp
- Genomic location
- unplaced_contig_298:25,557–26,120
- Strand
- +
Hass · mRNA
PaHa_c298g00160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 408
- bp
- unplaced_contig_298:25,557–26,120
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c298g00160
- eggNOG
- Preferred name: ELF1 | Seed ortholog: 675120.M2YMJ3 | COG: COG4888 | eggNOG OG: Elf1@131567|A-1
- Gene Ontology
- GO:0003711 transcription elongation factor activity; GO:0005634 nucleus; GO:0006283 transcription-coupled nucleotide-excision repair; GO:0006368 transcription elongation by RNA polymerase II
- KEGG
- KO: K25829 | BRITE: 00001, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c298g00160.1-protein
derives_fromgenePaHa_c298g00160
CDS
part_ofPaHa_c298g00160.1-CDS-unplaced_contig_298-1787993825:25557..25567CDS
part_ofPaHa_c298g00160.1-CDS-unplaced_contig_298-1787993825:25617..25650CDS
part_ofPaHa_c298g00160.1-CDS-unplaced_contig_298-1787993825:25704..25842CDS
part_ofPaHa_c298g00160.1-CDS-unplaced_contig_298-1787993825:25897..26120exon
part_ofPaHa_c298g00160.1-exon-unplaced_contig_298-1787993825:25557..25567exon
part_ofPaHa_c298g00160.1-exon-unplaced_contig_298-1787993825:25617..25650exon
part_ofPaHa_c298g00160.1-exon-unplaced_contig_298-1787993825:25704..25842exon
part_ofPaHa_c298g00160.1-exon-unplaced_contig_298-1787993825:25897..26120