Feature identity
- Identifier
- PaHa_c295g00130.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,410 bp
- Genomic location
- unplaced_contig_295:14,437–15,903
- Strand
- +
Hass · mRNA
PaHa_c295g00130.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,410
- bp
- unplaced_contig_295:14,437–15,903
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c295g00130
- eggNOG
- Preferred name: IWS1 | Seed ortholog: 1047168.A0A0F4GN48 | eggNOG OG: Med26@131567|L-4
- Gene Ontology
- GO:0000993 RNA polymerase II complex binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005665 RNA polymerase II, core complex; GO:0006334 nucleosome assembly; GO:0006357 regulation of transcription by RNA polymerase II; GO:0008150 biological_process; GO:0016973 poly(A)+ mRNA export from nucleus; GO:0034243 regulation of transcription elongation by RNA polymerase II; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding
- KEGG
- KO: K17498 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c295g00130.1-protein
derives_fromgenePaHa_c295g00130
CDS
part_ofPaHa_c295g00130.1-CDS-unplaced_contig_295-1787993825:14437..15013CDS
part_ofPaHa_c295g00130.1-CDS-unplaced_contig_295-1787993825:15071..15903exon
part_ofPaHa_c295g00130.1-exon-unplaced_contig_295-1787993825:14437..15013exon
part_ofPaHa_c295g00130.1-exon-unplaced_contig_295-1787993825:15071..15903