Feature identity
- Identifier
- PaHa_c289g00200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,773 bp
- Genomic location
- unplaced_contig_289:26,742–28,616
- Strand
- −
Hass · mRNA
PaHa_c289g00200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,773
- bp
- unplaced_contig_289:26,742–28,616
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c289g00200
- eggNOG
- Preferred name: COX1-1 | Seed ortholog: 1157616.A0A1Z5TR37 | COG: S | eggNOG OG: p450@131567|c-5, p450@134362|XTs-30, p450@2759|DPW-20, p450@4751|PGU-27
- Gene Ontology
- GO:0004497 monooxygenase activity; GO:0005506 iron ion binding; GO:0016020 membrane; GO:0016491 oxidoreductase activity; GO:0020037 heme binding; GO:0046872 metal ion binding
- KEGG
- KO: K22740 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c289g00200.1-protein
derives_fromgenePaHa_c289g00200
CDS
part_ofPaHa_c289g00200.1-CDS-unplaced_contig_289-1787993825:26742..27240CDS
part_ofPaHa_c289g00200.1-CDS-unplaced_contig_289-1787993825:27287..28337CDS
part_ofPaHa_c289g00200.1-CDS-unplaced_contig_289-1787993825:28394..28616exon
part_ofPaHa_c289g00200.1-exon-unplaced_contig_289-1787993825:26742..27240exon
part_ofPaHa_c289g00200.1-exon-unplaced_contig_289-1787993825:27287..28337exon
part_ofPaHa_c289g00200.1-exon-unplaced_contig_289-1787993825:28394..28616