Feature identity
- Identifier
- PaHa01g38800.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,830 bp
- Genomic location
- 1:92,846,296–92,849,368
- Strand
- +
Hass · mRNA
PaHa01g38800.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,830
- bp
- 1:92,846,296–92,849,368
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g38800
- eggNOG
- Preferred name: LAC3 | Seed ortholog: 337451.A0A3S3P274 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@1437183|Cps-24, Cu-oxidase@2759|v-6, Cu-oxidase@3193|Abn-19, Cu-oxidase@3398|BPk-21, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@131567|z-6, Cu-oxidase_2@1437183|Bco-24, Cu-oxidase_2@2759|HU-12, Cu-oxidase_2@3193|kL-18, Cu-oxidase_2@3398|AUI-21, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@1437183|Jfs-35, Cu-oxidase_3@2759|Av-9, Cu-oxidase_3@3193|FUG-30, Cu-oxidase_3@3398|GNM-31
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008150 biological_process; GO:0008447 L-ascorbate oxidase activity; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0048226 Casparian strip
- KEGG
- EC: ec:1.10.3.2 | KO: K05909 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g38800.1-protein
derives_frommRNAPaHa01g38800.1
mRNAPaHa01g38800.1
part_ofgenePaHa01g38800
CDS
part_ofPaHa01g38800.1-CDS-1-1787993825:92846296..92846412mRNAPaHa01g38800.1
CDS
part_ofPaHa01g38800.1-CDS-1-1787993825:92846488..92846639mRNAPaHa01g38800.1
CDS
part_ofPaHa01g38800.1-CDS-1-1787993825:92846955..92847199mRNAPaHa01g38800.1
CDS
part_ofPaHa01g38800.1-CDS-1-1787993825:92847592..92847720mRNAPaHa01g38800.1
CDS
part_ofPaHa01g38800.1-CDS-1-1787993825:92848182..92849368mRNAPaHa01g38800.1
exon
part_ofPaHa01g38800.1-exon-1-1787993825:92846296..92846412mRNAPaHa01g38800.1
exon
part_ofPaHa01g38800.1-exon-1-1787993825:92846488..92846639mRNAPaHa01g38800.1
exon
part_ofPaHa01g38800.1-exon-1-1787993825:92846955..92847199mRNAPaHa01g38800.1
exon
part_ofPaHa01g38800.1-exon-1-1787993825:92847592..92847720mRNAPaHa01g38800.1
exon
part_ofPaHa01g38800.1-exon-1-1787993825:92848182..92849368mRNAPaHa01g38800.1
