Feature identity
- Identifier
- PaHa01g38700.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,467 bp
- Genomic location
- 1:92,735,512–92,739,904
- Strand
- +
Hass · mRNA
PaHa01g38700.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,467
- bp
- 1:92,735,512–92,739,904
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g38700
- eggNOG
- Preferred name: WRKY33 | Seed ortholog: 337451.A0A3S4NT31 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Uo-17, WRKY@3193|AHz-23, WRKY@33090|AAb-22, WRKY@3398|BDl-28
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0009753 response to jasmonic acid; GO:0009788 negative regulation of abscisic acid-activated signaling pathway; GO:0009938 negative regulation of gibberellic acid mediated signaling pathway; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K13424 | Pathway: 04016, 04626 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g38700.1-protein
derives_frommRNAPaHa01g38700.1
mRNAPaHa01g38700.1
part_ofgenePaHa01g38700
CDS
part_ofPaHa01g38700.1-CDS-1-1787993825:92735512..92735814mRNAPaHa01g38700.1
CDS
part_ofPaHa01g38700.1-CDS-1-1787993825:92737459..92737647mRNAPaHa01g38700.1
CDS
part_ofPaHa01g38700.1-CDS-1-1787993825:92737808..92738439mRNAPaHa01g38700.1
CDS
part_ofPaHa01g38700.1-CDS-1-1787993825:92738741..92738902mRNAPaHa01g38700.1
CDS
part_ofPaHa01g38700.1-CDS-1-1787993825:92739724..92739904mRNAPaHa01g38700.1
exon
part_ofPaHa01g38700.1-exon-1-1787993825:92735512..92735814mRNAPaHa01g38700.1
exon
part_ofPaHa01g38700.1-exon-1-1787993825:92737459..92737647mRNAPaHa01g38700.1
exon
part_ofPaHa01g38700.1-exon-1-1787993825:92737808..92738439mRNAPaHa01g38700.1
exon
part_ofPaHa01g38700.1-exon-1-1787993825:92738741..92738902mRNAPaHa01g38700.1
exon
part_ofPaHa01g38700.1-exon-1-1787993825:92739724..92739904mRNAPaHa01g38700.1
