Feature identity
- Identifier
- PaHa_c267g00370.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 780 bp
- Genomic location
- unplaced_contig_267:35,724–36,503
- Strand
- +
Hass · mRNA
PaHa_c267g00370.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 780
- bp
- unplaced_contig_267:35,724–36,503
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c267g00370
- eggNOG
- Preferred name: SFP1 | Seed ortholog: 336722.F9WZ10 | COG: S | eggNOG OG: UNK.M1J8@33154|A-1
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0008361 regulation of cell size; GO:0034599 cellular response to oxidative stress; GO:0042546 cell wall biogenesis; GO:0043708 cell adhesion involved in biofilm formation; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0060963 positive regulation of ribosomal protein gene transcription by RNA polymerase II; GO:2000134 negative regulation of G1/S transition of mitotic cell cycle
- KEGG
- KO: K19487 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c267g00370.1-protein
derives_fromgenePaHa_c267g00370
CDS
part_ofPaHa_c267g00370.1-CDS-unplaced_contig_267-1787993825:35724..36503exon
part_ofPaHa_c267g00370.1-exon-unplaced_contig_267-1787993825:35724..36503