Anise · mRNA

Chr01.g00099.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,407
bp
Chr01:855,772–860,347
genomic location
Record overview

Feature identity

Identifier
Chr01.g00099.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,407 bp
Genomic location
Chr01:855,772–860,347
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
29760.VIT_01s0026g01910.t01,K,[Transcription factor]
Gene Ontology
Transcription factor | GO:0000003//reproduction; GO:0000278//mitotic cell cycle; GO:0000281//mitotic cytokinesis; GO:0000910//cytokinesis; GO:0000911//cytokinesis by cell plate formation; GO:0001101//response to acid chemical; GO:0003006//developmental process involved in reproduction; GO:0006275//regulation of DNA replication; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006810//transport; GO:0007049//cell cycle; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009553//embryo sac development; GO:0009554//megasporogenesis; GO:0009628//response to abiotic stimulus; GO:0009629//response to gravity; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009737//response to abscisic acid; GO:0009791//post-embryonic development; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009914//hormone transport; GO:0009926//auxin polar transport; GO:0009987//cellular process; GO:0010016//shoot system morphogenesis; GO:0010033//response to organic substance; GO:0010052//guard cell differentiation; GO:0010103//stomatal complex morphogenesis; GO:0010235//guard mother cell cytokinesis; GO:0010374//stomatal complex development; GO:0010376//stomatal complex formation; GO:0010440//stomatal lineage progression; GO:0010444//guard mother cell differentiation; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010564//regulation of cell cycle process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010638//positive regulation of organelle organization; GO:0010817//regulation of hormone levels; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019953//sexual reproduction; GO:0022402//cell cycle process; GO:0022414//reproductive process; GO:0022622//root system development; GO:0030104//water homeostasis; GO:0030154//cell differentiation; GO:0031056//regulation of histone modification; GO:0031058//positive regulation of histone modification; GO:0031060//regulation of histone methylation; GO:0031062//positive regulation of histone methylation; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031399//regulation of protein modification process; GO:0031401//positive regulation of protein modification process; GO:0032268//regulation of cellular protein metabolic process; GO:0032270//positive regulation of cellular protein metabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032506//cytokinetic process; GO:0032875//regulation of DNA endoreduplication; GO:0033043//regulation of organelle organization; GO:0033044//regulation of chromosome organization; GO:0033993//response to lipid; GO:0034293//sexual sporulation; GO:0042221//response to chemical; GO:0042592//homeostatic process; GO:0043934//sporulation; GO:0044703//multi-organism reproductive process; GO:0047484//regulation of response to osmotic stress; GO:0048229//gametophyte development; GO:0048236//plant-type sporogenesis; GO:0048364//root development; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048468//cell development; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048527//lateral root development; GO:0048528//post-embryonic root development; GO:0048580//regulation of post-embryonic development; GO:0048582//positive regulation of post-embryonic development; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048646//anatomical structure formation involved in morphogenesis; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0048871//multicellular organismal homeostasis; GO:0048878//chemical homeostasis; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050878//regulation of body fluid levels; GO:0050891//multicellular organismal water homeostasis; GO:0050896//response to stimulus; GO:0051052//regulation of DNA metabolic process; GO:0051094//positive regulation of developmental process; GO:0051128//regulation of cellular component organization; GO:0051130//positive regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051179//localization; GO:0051234//establishment of localization; GO:0051239//regulation of multicellular organismal process; GO:0051240//positive regulation of multicellular organismal process; GO:0051246//regulation of protein metabolic process; GO:0051247//positive regulation of protein metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051301//cell division; GO:0051321//meiotic cell cycle; GO:0051704//multi-organism process; GO:0051726//regulation of cell cycle; GO:0060255//regulation of macromolecule metabolic process; GO:0060918//auxin transport; GO:0061085//regulation of histone H3-K27 methylation; GO:0061087//positive regulation of histone H3-K27 methylation; GO:0061640//cytoskeleton-dependent cytokinesis; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0080022//primary root development; GO:0080090//regulation of primary metabolic process; GO:0080134//regulation of response to stress; GO:0090329//regulation of DNA-dependent DNA replication; GO:0090436//leaf pavement cell development; GO:0090558//plant epidermis development; GO:0090626//plant epidermis morphogenesis; GO:0090627//plant epidermal cell differentiation; GO:0090696//post-embryonic plant organ development; GO:0090698//post-embryonic plant morphogenesis; GO:0097305//response to alcohol; GO:0099402//plant organ development; GO:1901000//regulation of response to salt stress; GO:1901002//positive regulation of response to salt stress; GO:1901333//positive regulation of lateral root development; GO:1901700//response to oxygen-containing compound; GO:1901987//regulation of cell cycle phase transition; GO:1902275//regulation of chromatin organization; GO:1902410//mitotic cytokinetic process; GO:1902584//positive regulation of response to water deprivation; GO:1902806//regulation of cell cycle G1/S phase transition; GO:1903046//meiotic cell cycle process; GO:1903047//mitotic cell cycle process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1905269//positive regulation of chromatin organization; GO:2000023//regulation of lateral root development; GO:2000026//regulation of multicellular organismal development; GO:2000037//regulation of stomatal complex patterning; GO:2000069//regulation of post-embryonic root development; GO:2000070//regulation of response to water deprivation; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000280//regulation of root development; GO:2001141//regulation of RNA biosynthetic process; GO:2001252//positive regulation of chromosome organization | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0000981//RNA polymerase II transcription factor activity, sequence-specific DNA binding; GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0001067//regulatory region nucleic acid binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001134//transcription factor activity, transcription factor recruiting; GO:0001135//transcription factor activity, RNA polymerase II transcription factor recruiting; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09422 | MYBP
NR
RWR76161.1 SANT/Myb domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
F4IRB4.1 RecName: Full=Transcription factor MYB88; AltName: Full=Myb-related protein 88; Short=AtMYB88 [Arabidopsis thaliana]
Biological context

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