Anise · mRNA

Chr01.g01441.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,386
bp
Chr01:16,792,725–16,794,852
genomic location
Record overview

Feature identity

Identifier
Chr01.g01441.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,386 bp
Genomic location
Chr01:16,792,725–16,794,852
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010267723.1,S,[mediator of RNA polymerase II transcription subunit]
Gene Ontology
mediator of RNA polymerase II transcription subunit | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000428//DNA-directed RNA polymerase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005667//transcription factor complex; GO:0016591//DNA-directed RNA polymerase II, holoenzyme; GO:0016592//mediator complex; GO:0030880//RNA polymerase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0044798//nuclear transcription factor complex; GO:0055029//nuclear DNA-directed RNA polymerase complex; GO:0061695//transferase complex, transferring phosphorus-containing groups; GO:0070013//intracellular organelle lumen; GO:0070847//core mediator complex; GO:0090575//RNA polymerase II transcription factor complex; GO:1902494//catalytic complex; GO:1990234//transferase complex | -
NR
XP_010267723.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Nelumbo nucifera]
Swiss-Prot
Q9LZ00.1 RecName: Full=Mediator of RNA polymerase II transcription subunit 4 [Arabidopsis thaliana]
Biological context

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