Feature identity
- Identifier
- PaHa_c244g00220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,012 bp
- Genomic location
- unplaced_contig_244:20,046–23,416
- Strand
- +
Hass · mRNA
PaHa_c244g00220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,012
- bp
- unplaced_contig_244:20,046–23,416
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c244g00220
- eggNOG
- Preferred name: PXA1 | Seed ortholog: 236234.A0A1J9RS96 | COG: COG4178 | eggNOG OG: ABC_membrane_2@131567|A-1, ABC_membrane_2@2759|Fn-11, ABC_tran|U3P4TG@2759
- Gene Ontology
- GO:0005324 long-chain fatty acid transmembrane transporter activity; GO:0005515 protein binding; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0006635 fatty acid beta-oxidation; GO:0015867 ATP transport; GO:0015908 fatty acid transport; GO:0015910 long-chain fatty acid import into peroxisome; GO:0015916 fatty-acyl-CoA transport; GO:0042626 ATPase-coupled transmembrane transporter activity; GO:0042758 long-chain fatty acid catabolic process; GO:0042760 very long-chain fatty acid catabolic process; GO:0043190 ATP-binding cassette (ABC) transporter complex
- KEGG
- EC: ec:7.6.2.4 | KO: K15628 | Pathway: 02010, 04146 | BRITE: 00001, 01000, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c244g00220.1-protein
derives_fromgenePaHa_c244g00220
CDS
part_ofPaHa_c244g00220.1-CDS-unplaced_contig_244-1787993825:20046..20174CDS
part_ofPaHa_c244g00220.1-CDS-unplaced_contig_244-1787993825:20269..20430CDS
part_ofPaHa_c244g00220.1-CDS-unplaced_contig_244-1787993825:20593..20976CDS
part_ofPaHa_c244g00220.1-CDS-unplaced_contig_244-1787993825:21035..22718CDS
part_ofPaHa_c244g00220.1-CDS-unplaced_contig_244-1787993825:22764..23416exon
part_ofPaHa_c244g00220.1-exon-unplaced_contig_244-1787993825:20046..20174exon
part_ofPaHa_c244g00220.1-exon-unplaced_contig_244-1787993825:20269..20430exon
part_ofPaHa_c244g00220.1-exon-unplaced_contig_244-1787993825:20593..20976exon
part_ofPaHa_c244g00220.1-exon-unplaced_contig_244-1787993825:21035..22718exon
part_ofPaHa_c244g00220.1-exon-unplaced_contig_244-1787993825:22764..23416