Anise · mRNA

Chr01.g08817.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,220
bp
Chr01:88,108,037–88,129,566
genomic location
Record overview

Feature identity

Identifier
Chr01.g08817.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,220 bp
Genomic location
Chr01:88,108,037–88,129,566
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010255596.1,K,[MADS-box transcription factor]
Gene Ontology
MADS-box transcription factor | GO:0000003//reproduction; GO:0003002//regionalization; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0007389//pattern specification process; GO:0008150//biological_process; GO:0009553//embryo sac development; GO:0009555//pollen development; GO:0009653//anatomical structure morphogenesis; GO:0009791//post-embryonic development; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009908//flower development; GO:0009909//regulation of flower development; GO:0009911//positive regulation of flower development; GO:0010016//shoot system morphogenesis; GO:0010022//meristem determinacy; GO:0010073//meristem maintenance; GO:0010093//specification of floral organ identity; GO:0010094//specification of carpel identity; GO:0010154//fruit development; GO:0010228//vegetative to reproductive phase transition of meristem; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010582//floral meristem determinacy; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0035670//plant-type ovary development; GO:0040007//growth; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0048229//gametophyte development; GO:0048316//seed development; GO:0048367//shoot system development; GO:0048437//floral organ development; GO:0048438//floral whorl development; GO:0048439//flower morphogenesis; GO:0048440//carpel development; GO:0048443//stamen development; GO:0048444//floral organ morphogenesis; GO:0048445//carpel morphogenesis; GO:0048448//stamen morphogenesis; GO:0048449//floral organ formation; GO:0048455//stamen formation; GO:0048457//floral whorl morphogenesis; GO:0048459//floral whorl structural organization; GO:0048461//flower structural organization; GO:0048462//carpel formation; GO:0048466//androecium development; GO:0048467//gynoecium development; GO:0048481//plant ovule development; GO:0048507//meristem development; GO:0048509//regulation of meristem development; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048532//anatomical structure arrangement; GO:0048580//regulation of post-embryonic development; GO:0048582//positive regulation of post-embryonic development; GO:0048589//developmental growth; GO:0048608//reproductive structure development; GO:0048646//anatomical structure formation involved in morphogenesis; GO:0048731//system development; GO:0048827//phyllome development; GO:0048831//regulation of shoot system development; GO:0048832//specification of plant organ number; GO:0048833//specification of floral organ number; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0051094//positive regulation of developmental process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051240//positive regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0080060//integument development; GO:0080090//regulation of primary metabolic process; GO:0080112//seed growth; GO:0090567//reproductive shoot system development; GO:0090696//post-embryonic plant organ development; GO:0090697//post-embryonic plant organ morphogenesis; GO:0090698//post-embryonic plant morphogenesis; GO:0090701//specification of plant organ identity; GO:0099402//plant organ development; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:1905392//plant organ morphogenesis; GO:1905393//plant organ formation; GO:2000026//regulation of multicellular organismal development; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000241//regulation of reproductive process; GO:2000243//positive regulation of reproductive process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0046983//protein dimerization activity; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09264 | K09264
NR
RWR80928.1 MADS-box transcription factor Pe.am.AGL6.1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q8LLR1.1 RecName: Full=Agamous-like MADS-box protein MADS3; AltName: Full=Agamous-like protein 6; Short=VvAGL6; Short=VviAGL6a; AltName: Full=MADS-box protein 3; Short=VvMADS3 [Vitis vinifera]
Biological context

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