Anise · mRNA

Chr01.g09158.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

507
bp
Chr01:92,407,771–92,425,167
genomic location
Record overview

Feature identity

Identifier
Chr01.g09158.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
507 bp
Genomic location
Chr01:92,407,771–92,425,167
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010275139.1,K,[Upstream activation factor subunit]
Gene Ontology
Upstream activation factor subunit | GO:0006355//regulation of transcription, DNA-templated; GO:0006356//regulation of transcription from RNA polymerase I promoter; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045943//positive regulation of transcription from RNA polymerase I promoter; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000120//RNA polymerase I transcription factor complex; GO:0000500//RNA polymerase I upstream activating factor complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005667//transcription factor complex; GO:0005730//nucleolus; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044452//nucleolar part; GO:0044464//cell part; GO:0044798//nuclear transcription factor complex; GO:0070013//intracellular organelle lumen | -
NR
RWR81111.1 upstream activation factor subunit UAF30-like protein isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O74503.1 RecName: Full=Upstream activation factor subunit spp27; AltName: Full=Upstream activation factor 27 KDa subunit; Short=p27; AltName: Full=Upstream activation factor 30 KDa subunit; Short=p30; AltName: Full=Upstream activation factor subunit uaf30 [Schizosaccharomyces pombe 972h-]
Biological context

Connected feature records

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