Anise · mRNA

Chr02.g10626.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,946
bp
Chr02:6,733,913–6,750,418
genomic location
Record overview

Feature identity

Identifier
Chr02.g10626.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,946 bp
Genomic location
Chr02:6,733,913–6,750,418
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010255365.1,K,[transcription factor]
Gene Ontology
transcription factor | GO:0000902//cell morphogenesis; GO:0000904//cell morphogenesis involved in differentiation; GO:0001101//response to acid chemical; GO:0001708//cell fate specification; GO:0006355//regulation of transcription, DNA-templated; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008544//epidermis development; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009867//jasmonic acid mediated signaling pathway; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009913//epidermal cell differentiation; GO:0009957//epidermal cell fate specification; GO:0009962//regulation of flavonoid biosynthetic process; GO:0009963//positive regulation of flavonoid biosynthetic process; GO:0009987//cellular process; GO:0010026//trichome differentiation; GO:0010033//response to organic substance; GO:0010090//trichome morphogenesis; GO:0010091//trichome branching; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0016043//cellular component organization; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023052//signaling; GO:0030154//cell differentiation; GO:0030855//epithelial cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031537//regulation of anthocyanin metabolic process; GO:0031539//positive regulation of anthocyanin metabolic process; GO:0031540//regulation of anthocyanin biosynthetic process; GO:0031542//positive regulation of anthocyanin biosynthetic process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0032989//cellular component morphogenesis; GO:0042221//response to chemical; GO:0045165//cell fate commitment; GO:0048468//cell development; GO:0048518//positive regulation of biological process; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0060429//epithelium development; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071229//cellular response to acid chemical; GO:0071310//cellular response to organic substance; GO:0071395//cellular response to jasmonic acid stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0090558//plant epidermis development; GO:0090626//plant epidermis morphogenesis; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding
NR
RWR72192.1 transcription factor GLABRA 3-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9FN69.1 RecName: Full=Transcription factor GLABRA 3; AltName: Full=Basic helix-loop-helix protein 1; Short=AtMYC6; Short=AtbHLH1; Short=bHLH 1; AltName: Full=Protein SHAPESHIFTER; AltName: Full=Transcription factor EN 31; AltName: Full=bHLH transcription factor bHLH001 [Arabidopsis thaliana]
Biological context

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