Anise · mRNA

Chr02.g10654.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,058
bp
Chr02:7,119,119–7,121,122
genomic location
Record overview

Feature identity

Identifier
Chr02.g10654.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,058 bp
Genomic location
Chr02:7,119,119–7,121,122
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010262985.1,S,[Protein TRANSPARENT TESTA]
Gene Ontology
Protein TRANSPARENT TESTA | GO:0000003//reproduction; GO:0003002//regionalization; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0007389//pattern specification process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009653//anatomical structure morphogenesis; GO:0009790//embryo development; GO:0009791//post-embryonic development; GO:0009793//embryo development ending in seed dormancy; GO:0009812//flavonoid metabolic process; GO:0009813//flavonoid biosynthetic process; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009965//leaf morphogenesis; GO:0010016//shoot system morphogenesis; GO:0010051//xylem and phloem pattern formation; GO:0010087//phloem or xylem histogenesis; GO:0010154//fruit development; GO:0010305//leaf vascular tissue pattern formation; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010588//cotyledon vascular tissue pattern formation; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0022622//root system development; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0048316//seed development; GO:0048364//root development; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048598//embryonic morphogenesis; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048825//cotyledon development; GO:0048826//cotyledon morphogenesis; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:0090698//post-embryonic plant morphogenesis; GO:0099402//plant organ development; GO:1901576//organic substance biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1905392//plant organ morphogenesis; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding
NR
RWR72216.1 zinc finger protein WIP6-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9FX68.1 RecName: Full=Zinc finger protein WIP6; AltName: Full=Protein DEFECTIVELY ORGANIZED TRIBUTARIES 5; AltName: Full=WIP-domain protein 6; Short=AtWIP6 [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.