Anise · mRNA

Chr03.g28240.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,523
bp
Chr03:82,805,279–82,817,646
genomic location
Record overview

Feature identity

Identifier
Chr03.g28240.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,523 bp
Genomic location
Chr03:82,805,279–82,817,646
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010256022.1,H,[Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7']
Gene Ontology
Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' | GO:0006629//lipid metabolic process; GO:0006720//isoprenoid metabolic process; GO:0006721//terpenoid metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009987//cellular process; GO:0016108//tetraterpenoid metabolic process; GO:0016109//tetraterpenoid biosynthetic process; GO:0016114//terpenoid biosynthetic process; GO:0016116//carotenoid metabolic process; GO:0016117//carotenoid biosynthetic process; GO:0016119//carotene metabolic process; GO:0016120//carotene biosynthetic process; GO:0042214//terpene metabolic process; GO:0042440//pigment metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0046148//pigment biosynthetic process; GO:0046246//terpene biosynthetic process; GO:0052889//9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene; GO:0055114//oxidation-reduction process; GO:0071704//organic substance metabolic process; GO:1901175//lycopene metabolic process; GO:1901177//lycopene biosynthetic process; GO:1901576//organic substance biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009509//chromoplast; GO:0009526//plastid envelope; GO:0009536//plastid; GO:0009941//chloroplast envelope; GO:0031967//organelle envelope; GO:0031975//envelope; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044434//chloroplast part; GO:0044435//plastid part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0016491//oxidoreductase activity; GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors; GO:0016635//oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor; GO:0052886//9,9'-dicis-carotene:quinone oxidoreductase activity
KEGG
K00514 | ZDS, crtQ
NR
RWR77708.1 zeta-carotene desaturase, chloroplastic/chromoplastic [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O49901.1 RecName: Full=Zeta-carotene desaturase, chloroplastic/chromoplastic; AltName: Full=9,9'-di-cis-zeta-carotene desaturase; AltName: Full=Carotene 7,8-desaturase; Flags: Precursor [Narcissus pseudonarcissus]
Biological context

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