Anise · mRNA

Chr03.g28559.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

949
bp
Chr03:86,723,601–86,728,167
genomic location
Record overview

Feature identity

Identifier
Chr03.g28559.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
949 bp
Genomic location
Chr03:86,723,601–86,728,167
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3847.GLYMA12G30240.1,K,[Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION]
Gene Ontology
Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION | GO:0000302//response to reactive oxygen species; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0006979//response to oxidative stress; GO:0008150//biological_process; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010038//response to metal ion; GO:0010039//response to iron ion; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010959//regulation of metal ion transport; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032870//cellular response to hormone stimulus; GO:0032879//regulation of localization; GO:0033554//cellular response to stress; GO:0034599//cellular response to oxidative stress; GO:0034614//cellular response to reactive oxygen species; GO:0034756//regulation of iron ion transport; GO:0035690//cellular response to drug; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0043269//regulation of ion transport; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051049//regulation of transport; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071241//cellular response to inorganic substance; GO:0071248//cellular response to metal ion; GO:0071281//cellular response to iron ion; GO:0071310//cellular response to organic substance; GO:0071369//cellular response to ethylene stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0071731//response to nitric oxide; GO:0071732//cellular response to nitric oxide; GO:0080090//regulation of primary metabolic process; GO:0097366//response to bronchodilator; GO:1901698//response to nitrogen compound; GO:1901699//cellular response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1902170//cellular response to reactive nitrogen species; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | - | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding
NR
RWR77896.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9ZVX2.2 RecName: Full=Transcription factor ABORTED MICROSPORES; AltName: Full=Basic helix-loop-helix protein 21; Short=AtbHLH21; Short=bHLH 21; AltName: Full=Transcription factor EN 48; AltName: Full=bHLH transcription factor bHLH021 [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.