Feature identity
- Identifier
- PaHa_c162g00160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,266 bp
- Genomic location
- unplaced_contig_162:14,681–16,287
- Strand
- −
Hass · mRNA
PaHa_c162g00160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,266
- bp
- unplaced_contig_162:14,681–16,287
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c162g00160
- eggNOG
- Preferred name: CRC1_2 | Seed ortholog: 1460663.A0A177CW99 | COG: S | eggNOG OG: Mito_carr@131567|AGw-26, Mito_carr@2759|CYs-35
- Gene Ontology
- GO:0003674 molecular_function; GO:0005476 carnitine:O-acyl-L-carnitine antiporter activity; GO:0005575 cellular_component; GO:0005739 mitochondrion; GO:0005743 mitochondrial inner membrane; GO:0005886 plasma membrane; GO:0006631 fatty acid metabolic process; GO:0008150 biological_process; GO:0015226 carnitine transmembrane transporter activity; GO:0015879 carnitine transport; GO:0015976 carbon utilization; GO:0045733 acetate catabolic process; GO:1902603 carnitine transmembrane transport
- KEGG
- KO: K15109 | Pathway: 04714 | BRITE: 00001, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c162g00160.1-protein
derives_fromgenePaHa_c162g00160
CDS
part_ofPaHa_c162g00160.1-CDS-unplaced_contig_162-1787993825:14681..15353CDS
part_ofPaHa_c162g00160.1-CDS-unplaced_contig_162-1787993825:15463..15671CDS
part_ofPaHa_c162g00160.1-CDS-unplaced_contig_162-1787993825:15775..16018CDS
part_ofPaHa_c162g00160.1-CDS-unplaced_contig_162-1787993825:16148..16287exon
part_ofPaHa_c162g00160.1-exon-unplaced_contig_162-1787993825:14681..15353exon
part_ofPaHa_c162g00160.1-exon-unplaced_contig_162-1787993825:15463..15671exon
part_ofPaHa_c162g00160.1-exon-unplaced_contig_162-1787993825:15775..16018exon
part_ofPaHa_c162g00160.1-exon-unplaced_contig_162-1787993825:16148..16287