Feature identity
- Identifier
- PaHa_c154g00170.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,653 bp
- Genomic location
- unplaced_contig_154:23,475–25,218
- Strand
- +
Hass · mRNA
PaHa_c154g00170.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,653
- bp
- unplaced_contig_154:23,475–25,218
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c154g00170
- eggNOG
- Preferred name: NDE1_2 | Seed ortholog: 215243.A0A0D2E0D8 | COG: COG1252 | eggNOG OG: Pyr_redox_2@131567|TB-17!, Pyr_redox_2@2759|DcN-28, Pyr_redox_2@4751|Lil-34
- Gene Ontology
- GO:0003954 NADH dehydrogenase activity; GO:0003959 NADPH dehydrogenase activity; GO:0003960 quinone reductase (NADPH) activity; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005743 mitochondrial inner membrane; GO:0005759 mitochondrial matrix; GO:0005777 peroxisome; GO:0006120 mitochondrial electron transport, NADH to ubiquinone; GO:0008137 NADH dehydrogenase (ubiquinone) activity; GO:0016491 oxidoreductase activity; GO:0020023 kinetoplast; GO:0071482 cellular response to light stimulus
- KEGG
- EC: ec:1.6.5.9 | KO: K03885 | Pathway: 00190, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c154g00170.1-protein
derives_fromgenePaHa_c154g00170
CDS
part_ofPaHa_c154g00170.1-CDS-unplaced_contig_154-1787993825:23475..24135CDS
part_ofPaHa_c154g00170.1-CDS-unplaced_contig_154-1787993825:24227..25218exon
part_ofPaHa_c154g00170.1-exon-unplaced_contig_154-1787993825:23475..24135exon
part_ofPaHa_c154g00170.1-exon-unplaced_contig_154-1787993825:24227..25218