Anise · mRNA

Chr06.g45620.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,087
bp
Chr06:22,785,691–22,805,391
genomic location
Record overview

Feature identity

Identifier
Chr06.g45620.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,087 bp
Genomic location
Chr06:22,785,691–22,805,391
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010262036.1,S,[Lycopene epsilon cyclase]
Gene Ontology
Lycopene epsilon cyclase | GO:0006629//lipid metabolic process; GO:0006720//isoprenoid metabolic process; GO:0006721//terpenoid metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009987//cellular process; GO:0016108//tetraterpenoid metabolic process; GO:0016109//tetraterpenoid biosynthetic process; GO:0016114//terpenoid biosynthetic process; GO:0016116//carotenoid metabolic process; GO:0016117//carotenoid biosynthetic process; GO:0016122//xanthophyll metabolic process; GO:0016123//xanthophyll biosynthetic process; GO:0042440//pigment metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0046148//pigment biosynthetic process; GO:0071704//organic substance metabolic process; GO:1901576//organic substance biosynthetic process | - | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0009975//cyclase activity; GO:0016853//isomerase activity; GO:0016860//intramolecular oxidoreductase activity; GO:0045435//lycopene epsilon cyclase activity
KEGG
K06444 | lcyE, crtL2
NR
RWR88821.1 lycopene epsilon cyclase, chloroplastic isoform X2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O65837.1 RecName: Full=Lycopene epsilon cyclase, chloroplastic; Flags: Precursor [Solanum lycopersicum]
Biological context

Connected feature records

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