Feature identity
- Identifier
- PaHa_c127g00380.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,872 bp
- Genomic location
- unplaced_contig_127:44,943–46,920
- Strand
- −
Hass · mRNA
PaHa_c127g00380.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,872
- bp
- unplaced_contig_127:44,943–46,920
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c127g00380
- eggNOG
- Preferred name: FG01867.1 | Seed ortholog: 1460663.A0A177C8N7 | eggNOG OG: FAD_binding_1@131567|X-5, NAD_binding_1@131567|Ll-14
- Gene Ontology
- GO:0003958 NADPH-hemoprotein reductase activity; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0010181 FMN binding; GO:0016723 oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor; GO:0030586 [methionine synthase] reductase (NADPH) activity; GO:0050660 flavin adenine dinucleotide binding; GO:0070402 NADPH binding; GO:0071266 'de novo' L-methionine biosynthetic process; GO:0071949 FAD binding; GO:0140104 molecular carrier activity
- KEGG
- EC: ec:1.16.1.8 | KO: K00597 | Pathway: 04980 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c127g00380.1-protein
derives_fromgenePaHa_c127g00380
CDS
part_ofPaHa_c127g00380.1-CDS-unplaced_contig_127-1787993825:44943..46431CDS
part_ofPaHa_c127g00380.1-CDS-unplaced_contig_127-1787993825:46538..46920exon
part_ofPaHa_c127g00380.1-exon-unplaced_contig_127-1787993825:44943..46431exon
part_ofPaHa_c127g00380.1-exon-unplaced_contig_127-1787993825:46538..46920