Feature identity
- Identifier
- PaHa01g36040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 810 bp
- Genomic location
- 1:89,068,699–89,070,925
- Strand
- +
Hass · mRNA
PaHa01g36040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 810
- bp
- 1:89,068,699–89,070,925
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g36040
- eggNOG
- Preferred name: LOC104596369 | Seed ortholog: 337451.A0A3S3MRK2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|IJi-41, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|HJx-40
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010090 trichome morphogenesis; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0048481 plant ovule development; GO:0048629 trichome patterning; GO:0090377 seed trichome initiation; GO:0090378 seed trichome elongation
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g36040.1-protein
derives_frommRNAPaHa01g36040.1
mRNAPaHa01g36040.1
part_ofgenePaHa01g36040
CDS
part_ofPaHa01g36040.1-CDS-1-1787993825:89068699..89068840mRNAPaHa01g36040.1
CDS
part_ofPaHa01g36040.1-CDS-1-1787993825:89069605..89069734mRNAPaHa01g36040.1
CDS
part_ofPaHa01g36040.1-CDS-1-1787993825:89070388..89070925mRNAPaHa01g36040.1
exon
part_ofPaHa01g36040.1-exon-1-1787993825:89068699..89068840mRNAPaHa01g36040.1
exon
part_ofPaHa01g36040.1-exon-1-1787993825:89069605..89069734mRNAPaHa01g36040.1
exon
part_ofPaHa01g36040.1-exon-1-1787993825:89070388..89070925mRNAPaHa01g36040.1
