Feature identity
- Identifier
- Chr08.g57842.m1
- Feature type
- mRNA
- Genome collection
- Anise
- Organism
- Persea americana-Anise
- Sequence length
- 1,065 bp
- Genomic location
- Chr08:1,978,615–1,981,252
- Strand
- −
Anise · mRNA
Chr08.g57842.m1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,065
- bp
- Chr08:1,978,615–1,981,252
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Chr08.g57842
- eggNOG
- 72664.XP_006402598.1,Q,[Belongs to the iron ascorbate-dependent oxidoreductase family]
- NR
- OVA07861.1 Oxoglutarate/iron-dependent dioxygenase [Macleaya cordata]
- Swiss-Prot
- Q6YYX9.1 RecName: Full=Probable 2-oxoglutarate-dependent dioxygenase SLC1; AltName: Full=2-oxoglutarate-dependent dioxygenase 4; AltName: Full=Gibberellin 20 oxidase 7; Short=OsGA20ox7; AltName: Full=Protein SLENDER AND CRINKLY LEAF 1 [Oryza sativa Japonica Group]
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptideChr08.g57842.m1-protein
derives_frommRNAChr08.g57842.m1
mRNAChr08.g57842.m1
part_ofgeneChr08.g57842
CDS
part_ofChr08.g57842.m1.cdsmRNAChr08.g57842.m1
exon
part_ofChr08.g57842.m1.exon1mRNAChr08.g57842.m1
exon
part_ofChr08.g57842.m1.exon2mRNAChr08.g57842.m1
exon
part_ofChr08.g57842.m1.exon3mRNAChr08.g57842.m1
