Feature identity
- Identifier
- PaHa_c110g00200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 903 bp
- Genomic location
- unplaced_contig_110:24,766–25,956
- Strand
- +
Hass · mRNA
PaHa_c110g00200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 903
- bp
- unplaced_contig_110:24,766–25,956
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c110g00200
- eggNOG
- Preferred name: FG00517.1 | Seed ortholog: 1448308.A0A2T2N966 | COG: S | eggNOG OG: DUF3237@131567|F-3, DUF3237@4751|k-6, Rrn6@33154|A-1
- Gene Ontology
- GO:0001163 RNA polymerase I transcription regulatory region sequence-specific DNA binding; GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001181 RNA polymerase I general transcription initiation factor activity; GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0006361 transcription initiation at RNA polymerase I promoter; GO:0008150 biological_process; GO:0042790 nucleolar large rRNA transcription by RNA polymerase I
- KEGG
- KO: K15218 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c110g00200.1-protein
derives_fromgenePaHa_c110g00200
CDS
part_ofPaHa_c110g00200.1-CDS-unplaced_contig_110-1787993825:24766..24952CDS
part_ofPaHa_c110g00200.1-CDS-unplaced_contig_110-1787993825:25241..25956exon
part_ofPaHa_c110g00200.1-exon-unplaced_contig_110-1787993825:24766..24952exon
part_ofPaHa_c110g00200.1-exon-unplaced_contig_110-1787993825:25241..25956