Anise · mRNA

Chr09.g64723.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,876
bp
Chr09:13,330,098–13,331,973
genomic location
Record overview

Feature identity

Identifier
Chr09.g64723.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,876 bp
Genomic location
Chr09:13,330,098–13,331,973
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
981085.XP_010092130.1,O,[Fatty acid desaturase 4]
Gene Ontology
Fatty acid desaturase 4 | GO:0000209//protein polyubiquitination; GO:0006082//organic acid metabolic process; GO:0006464//cellular protein modification process; GO:0006508//proteolysis; GO:0006511//ubiquitin-dependent protein catabolic process; GO:0006629//lipid metabolic process; GO:0006631//fatty acid metabolic process; GO:0006633//fatty acid biosynthetic process; GO:0006636//unsaturated fatty acid biosynthetic process; GO:0006644//phospholipid metabolic process; GO:0006650//glycerophospholipid metabolic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008610//lipid biosynthetic process; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009058//biosynthetic process; GO:0009628//response to abiotic stimulus; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010243//response to organonitrogen compound; GO:0010498//proteasomal protein catabolic process; GO:0016053//organic acid biosynthetic process; GO:0016567//protein ubiquitination; GO:0019538//protein metabolic process; GO:0019637//organophosphate metabolic process; GO:0019752//carboxylic acid metabolic process; GO:0019941//modification-dependent protein catabolic process; GO:0030163//protein catabolic process; GO:0030433//ubiquitin-dependent ERAD pathway; GO:0032446//protein modification by small protein conjugation; GO:0032787//monocarboxylic acid metabolic process; GO:0033554//cellular response to stress; GO:0033559//unsaturated fatty acid metabolic process; GO:0034976//response to endoplasmic reticulum stress; GO:0036211//protein modification process; GO:0036503//ERAD pathway; GO:0042221//response to chemical; GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043436//oxoacid metabolic process; GO:0043632//modification-dependent macromolecule catabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0044257//cellular protein catabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044267//cellular protein metabolic process; GO:0044281//small molecule metabolic process; GO:0044283//small molecule biosynthetic process; GO:0046394//carboxylic acid biosynthetic process; GO:0046471//phosphatidylglycerol metabolic process; GO:0046486//glycerolipid metabolic process; GO:0050896//response to stimulus; GO:0051603//proteolysis involved in cellular protein catabolic process; GO:0051716//cellular response to stimulus; GO:0055114//oxidation-reduction process; GO:0070647//protein modification by small protein conjugation or removal; GO:0071704//organic substance metabolic process; GO:0072330//monocarboxylic acid biosynthetic process; GO:0080167//response to karrikin; GO:1901564//organonitrogen compound metabolic process; GO:1901565//organonitrogen compound catabolic process; GO:1901575//organic substance catabolic process; GO:1901576//organic substance biosynthetic process; GO:1901698//response to nitrogen compound | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005783//endoplasmic reticulum; GO:0009507//chloroplast; GO:0009526//plastid envelope; GO:0009536//plastid; GO:0009941//chloroplast envelope; GO:0012505//endomembrane system; GO:0016020//membrane; GO:0031090//organelle membrane; GO:0031967//organelle envelope; GO:0031969//chloroplast membrane; GO:0031975//envelope; GO:0042170//plastid membrane; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044434//chloroplast part; GO:0044435//plastid part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004842//ubiquitin-protein transferase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0016491//oxidoreductase activity; GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016740//transferase activity; GO:0019787//ubiquitin-like protein transferase activity; GO:0019899//enzyme binding; GO:0031625//ubiquitin protein ligase binding; GO:0044389//ubiquitin-like protein ligase binding; GO:0052637//delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity; GO:0061630//ubiquitin protein ligase activity; GO:0061659//ubiquitin-like protein ligase activity
KEGG
K20417 | FAD4
NR
RWR94865.1 fatty acid desaturase 4, chloroplastic [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SZ42.1 RecName: Full=Fatty acid desaturase 4, chloroplastic; AltName: Full=Fatty acid desaturase A; Flags: Precursor [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.