Anise · mRNA

Chr09.g67776.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

4,709
bp
Chr09:41,263,367–41,276,552
genomic location
Record overview

Feature identity

Identifier
Chr09.g67776.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
4,709 bp
Genomic location
Chr09:41,263,367–41,276,552
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010260096.1,K,[Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation]
Gene Ontology
Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation | GO:0000003//reproduction; GO:0001101//response to acid chemical; GO:0001510//RNA methylation; GO:0003006//developmental process involved in reproduction; GO:0006139//nucleobase-containing compound metabolic process; GO:0006396//RNA processing; GO:0006399//tRNA metabolic process; GO:0006400//tRNA modification; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006979//response to oxidative stress; GO:0007275//multicellular organism development; GO:0008033//tRNA processing; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008283//cell proliferation; GO:0008284//positive regulation of cell proliferation; GO:0009451//RNA modification; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009737//response to abscisic acid; GO:0009787//regulation of abscisic acid-activated signaling pathway; GO:0009892//negative regulation of metabolic process; GO:0009965//leaf morphogenesis; GO:0009966//regulation of signal transduction; GO:0009987//cellular process; GO:0010016//shoot system morphogenesis; GO:0010033//response to organic substance; GO:0010154//fruit development; GO:0010467//gene expression; GO:0010646//regulation of cell communication; GO:0010928//regulation of auxin mediated signaling pathway; GO:0016070//RNA metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0023051//regulation of signaling; GO:0030488//tRNA methylation; GO:0031537//regulation of anthocyanin metabolic process; GO:0031538//negative regulation of anthocyanin metabolic process; GO:0032259//methylation; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0033993//response to lipid; GO:0034470//ncRNA processing; GO:0034641//cellular nitrogen compound metabolic process; GO:0034660//ncRNA metabolic process; GO:0035265//organ growth; GO:0040007//growth; GO:0042127//regulation of cell proliferation; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043414//macromolecule methylation; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0046483//heterocycle metabolic process; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048530//fruit morphogenesis; GO:0048583//regulation of response to stimulus; GO:0048589//developmental growth; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048827//phyllome development; GO:0048831//regulation of shoot system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051239//regulation of multicellular organismal process; GO:0051716//cellular response to stimulus; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071215//cellular response to abscisic acid stimulus; GO:0071229//cellular response to acid chemical; GO:0071310//cellular response to organic substance; GO:0071396//cellular response to lipid; GO:0071495//cellular response to endogenous stimulus; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:0080178//5-carbamoylmethyl uridine residue modification; GO:0090304//nucleic acid metabolic process; GO:0090698//post-embryonic plant morphogenesis; GO:0097305//response to alcohol; GO:0097306//cellular response to alcohol; GO:0099402//plant organ development; GO:1901360//organic cyclic compound metabolic process; GO:1901419//regulation of response to alcohol; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1905392//plant organ morphogenesis; GO:1905957//regulation of cellular response to alcohol; GO:2000024//regulation of leaf development; GO:2000026//regulation of multicellular organismal development | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0032991//macromolecular complex; GO:0033588//Elongator holoenzyme complex; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | -
KEGG
K11373 | ELP1, IKI3, IKBKAP
NR
RWR95444.1 elongator complex protein 1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9FNA4.1 RecName: Full=Elongator complex protein 1; Short=AtELP1; AltName: Full=Elongator component 1; AltName: Full=Protein ABA-OVERLY SENSITIVE 1; AltName: Full=Protein ELONGATA 2 [Arabidopsis thaliana]
Biological context

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