Feature identity
- Identifier
- PaHa_c81g00010.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,482 bp
- Genomic location
- unplaced_contig_81:29,865–35,515
- Strand
- +
Hass · mRNA
PaHa_c81g00010.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,482
- bp
- unplaced_contig_81:29,865–35,515
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c81g00010
- eggNOG
- Preferred name: HSFA1 | Seed ortholog: 337451.A0A3S3MV96 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@3193|AWd-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|BEb-26, HSF_DNA-bind@35493|uY-20
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat
- KEGG
- KO: K09419 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c81g00010.1-protein
derives_frommRNAPaHa_c81g00010.1
mRNAPaHa_c81g00010.1
part_ofgenePaHa_c81g00010
CDS
part_ofPaHa_c81g00010.1-CDS-unplaced_contig_81-1787993825:29865..30092mRNAPaHa_c81g00010.1
CDS
part_ofPaHa_c81g00010.1-CDS-unplaced_contig_81-1787993825:34262..35515mRNAPaHa_c81g00010.1
exon
part_ofPaHa_c81g00010.1-exon-unplaced_contig_81-1787993825:29865..30092mRNAPaHa_c81g00010.1
exon
part_ofPaHa_c81g00010.1-exon-unplaced_contig_81-1787993825:34262..35515mRNAPaHa_c81g00010.1
