Feature identity
- Identifier
- PaHa01g35140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 660 bp
- Genomic location
- 1:87,890,880–87,895,096
- Strand
- −
Hass · mRNA
PaHa01g35140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 660
- bp
- 1:87,890,880–87,895,096
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g35140
- eggNOG
- Preferred name: WRKY12 | Seed ortholog: 337451.A0A3S3Q7Y6 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|VE-17, WRKY@3398|fr-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009832 plant-type cell wall biogenesis; GO:0043565 sequence-specific DNA binding
- KEGG
- EC: ec:2.4.1.260 | KO: K03847 | Pathway: 00510, 00513, 01100 | Module: M00055 | BRITE: 00001, 01000, 01003
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g35140.1-protein
derives_frommRNAPaHa01g35140.1
mRNAPaHa01g35140.1
part_ofgenePaHa01g35140
CDS
part_ofPaHa01g35140.1-CDS-1-1787993825:87890880..87890986mRNAPaHa01g35140.1
CDS
part_ofPaHa01g35140.1-CDS-1-1787993825:87891152..87891246mRNAPaHa01g35140.1
CDS
part_ofPaHa01g35140.1-CDS-1-1787993825:87894198..87894359mRNAPaHa01g35140.1
CDS
part_ofPaHa01g35140.1-CDS-1-1787993825:87894692..87894756mRNAPaHa01g35140.1
CDS
part_ofPaHa01g35140.1-CDS-1-1787993825:87894866..87895096mRNAPaHa01g35140.1
exon
part_ofPaHa01g35140.1-exon-1-1787993825:87890880..87890986mRNAPaHa01g35140.1
exon
part_ofPaHa01g35140.1-exon-1-1787993825:87891152..87891246mRNAPaHa01g35140.1
exon
part_ofPaHa01g35140.1-exon-1-1787993825:87894198..87894359mRNAPaHa01g35140.1
exon
part_ofPaHa01g35140.1-exon-1-1787993825:87894692..87894756mRNAPaHa01g35140.1
exon
part_ofPaHa01g35140.1-exon-1-1787993825:87894866..87895096mRNAPaHa01g35140.1
