Feature identity
- Identifier
- PaHa01g35130.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,737 bp
- Genomic location
- 1:87,864,104–87,874,317
- Strand
- −
Hass · mRNA
PaHa01g35130.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,737
- bp
- 1:87,864,104–87,874,317
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g35130
- eggNOG
- Preferred name: GATA26 | Seed ortholog: 337451.A0A3S3MJ89 | COG: S | eggNOG OG: GATA@131567|A-1*, GATA@2759|Cp-10
- Gene Ontology
- GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006338 chromatin remodeling; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009416 response to light stimulus; GO:0009845 seed germination; GO:0030447 filamentous growth; GO:0033696 heterochromatin boundary formation; GO:0034605 cellular response to heat; GO:0045815 transcription initiation-coupled chromatin remodeling; GO:0071280 cellular response to copper ion; GO:0071285 cellular response to lithium ion; GO:0071466 cellular response to xenobiotic stimulus; GO:1905177 tracheary element differentiation
- KEGG
- KO: K09184, K11648, K11770, K14972, K23407 | Pathway: 03082, 03250 | BRITE: 00001, 01009, 03000, 03021, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g35130.1-protein
derives_frommRNAPaHa01g35130.1
mRNAPaHa01g35130.1
part_ofgenePaHa01g35130
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87864104..87864504mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87865571..87865688mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87865792..87865978mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87866365..87866468mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87869699..87869771mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87870146..87870587mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87871544..87871915mRNAPaHa01g35130.1
CDS
part_ofPaHa01g35130.1-CDS-1-1787993825:87874278..87874317mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87864104..87864504mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87865571..87865688mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87865792..87865978mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87866365..87866468mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87869699..87869771mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87870146..87870587mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87871544..87871915mRNAPaHa01g35130.1
exon
part_ofPaHa01g35130.1-exon-1-1787993825:87874278..87874317mRNAPaHa01g35130.1
