Feature identity
- Identifier
- Chr12.g83007.m1
- Feature type
- mRNA
- Genome collection
- Anise
- Organism
- Persea americana-Anise
- Sequence length
- 1,871 bp
- Genomic location
- Chr12:47,554,702–47,559,566
- Strand
- +
Anise · mRNA
Chr12.g83007.m1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,871
- bp
- Chr12:47,554,702–47,559,566
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Chr12.g83007
- eggNOG
- 42345.XP_008806374.1,Q,[Belongs to the iron ascorbate-dependent oxidoreductase family]
- NR
- RWR96216.1 flavonol synthase/flavanone 3-hydroxylase [Cinnamomum micranthum f. kanehirae]
- Swiss-Prot
- Q96323.1 RecName: Full=Leucoanthocyanidin dioxygenase; Short=LDOX; Short=Leucocyanidin oxygenase; AltName: Full=Anthocyanidin synthase; Short=ANS; AltName: Full=Leucoanthocyanidin hydroxylase; AltName: Full=Protein TANNIN DEFICIENT SEED 4; Short=TDS4; AltName: Full=Protein TRANSPARENT TESTA 11; Short=TT11; AltName: Full=Protein TRANSPARENT TESTA 17; Short=TT17; AltName: Full=Protein TRANSPARENT TESTA 18; Short=TT18 [Arabidopsis thaliana]
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptideChr12.g83007.m1-protein
derives_frommRNAChr12.g83007.m1
mRNAChr12.g83007.m1
part_ofgeneChr12.g83007
CDS
part_ofChr12.g83007.m1.cdsmRNAChr12.g83007.m1
exon
part_ofChr12.g83007.m1.exon1mRNAChr12.g83007.m1
exon
part_ofChr12.g83007.m1.exon2mRNAChr12.g83007.m1
exon
part_ofChr12.g83007.m1.exon3mRNAChr12.g83007.m1
five_prime_UTR
part_ofChr12.g83007.m1.utr5p1mRNAChr12.g83007.m1
