Feature identity
- Identifier
- scaffold292.g84502.m1
- Feature type
- mRNA
- Genome collection
- Anise
- Organism
- Persea americana-Anise
- Sequence length
- 376 bp
- Genomic location
- scaffold292:1,141–2,539
- Strand
- +
Anise · mRNA
scaffold292.g84502.m1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 376
- bp
- scaffold292:1,141–2,539
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: scaffold292.g84502
- eggNOG
- 2711.XP_006466161.1,C,[One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation]
- KEGG
- K02705 | psbC
- NR
- KAG5383805.1 hypothetical protein IGI04_035275 [Brassica rapa subsp. trilocularis]
- Swiss-Prot
- Q68S10.1 RecName: Full=Photosystem II CP43 reaction center protein; AltName: Full=PSII 43 kDa protein; AltName: Full=Protein CP-43; Flags: Precursor [Panax ginseng]
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidescaffold292.g84502.m1-protein
derives_fromCDS
part_ofscaffold292.g84502.m1.cdsexon
part_ofscaffold292.g84502.m1.exon1exon
part_ofscaffold292.g84502.m1.exon2exon
part_ofscaffold292.g84502.m1.exon3