Anise · gene

Chr01.g02394

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,738
bp
Chr01:28,808,227–28,814,964
genomic location
Record overview

Feature identity

Identifier
Chr01.g02394
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
6,738 bp
Genomic location
Chr01:28,808,227–28,814,964
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010273228.1,S,[lycopene beta cyclase]
Gene Ontology
lycopene beta cyclase | GO:0006629//lipid metabolic process; GO:0006720//isoprenoid metabolic process; GO:0006721//terpenoid metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009987//cellular process; GO:0016108//tetraterpenoid metabolic process; GO:0016109//tetraterpenoid biosynthetic process; GO:0016114//terpenoid biosynthetic process; GO:0016116//carotenoid metabolic process; GO:0016117//carotenoid biosynthetic process; GO:0042440//pigment metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0046148//pigment biosynthetic process; GO:0071704//organic substance metabolic process; GO:1901576//organic substance biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009509//chromoplast; GO:0009536//plastid; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0009975//cyclase activity; GO:0016853//isomerase activity; GO:0016860//intramolecular oxidoreductase activity; GO:0045436//lycopene beta cyclase activity
KEGG
K06443 | lcyB, crtL1, crtY
NR
RWR79873.1 lycopene beta cyclase, chloroplastic [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q43503.1 RecName: Full=Lycopene beta cyclase, chloroplastic; Flags: Precursor [Solanum lycopersicum]
Biological context

Connected feature records

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