Feature identity
- Identifier
- PaHa12g17580.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,236 bp
- Genomic location
- 12:49,542,473–49,546,598
- Strand
- +
Hass · mRNA
PaHa12g17580.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,236
- bp
- 12:49,542,473–49,546,598
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g17580
- eggNOG
- Preferred name: PED1 | Seed ortholog: 337451.A0A443PZB7 | COG: COG0183 | eggNOG OG: Thiolase_C@131567|Tu-17, Thiolase_C@3398|GFJ-34, Thiolase_N@131567|Mj-14, Thiolase_N@3398|ILG-32
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0003988 acetyl-CoA C-acyltransferase activity; GO:0005515 protein binding; GO:0005730 nucleolus; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0006635 fatty acid beta-oxidation; GO:0009507 chloroplast; GO:0009514 glyoxysome; GO:0009611 response to wounding; GO:0009695 jasmonic acid biosynthetic process; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0010111 glyoxysome organization
- KEGG
- EC: ec:2.3.1.16 | KO: K07513 | Pathway: 00071, 00280, 00592, 01040, 01100, 01110, 01212, 04146 | Module: M00087, M00113, M00861 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g17580.1-protein
derives_frommRNAPaHa12g17580.1
mRNAPaHa12g17580.1
part_ofgenePaHa12g17580
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49542473..49542535mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49542634..49542710mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49542833..49542917mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49543113..49543239mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49543332..49543430mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49543567..49543604mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49543690..49543767mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49543892..49543969mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49544088..49544220mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49544921..49544934mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49545041..49545057mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49545421..49545544mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49545661..49545769mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49546324..49546407mRNAPaHa12g17580.1
CDS
part_ofPaHa12g17580.1-CDS-12-1787993825:49546489..49546598mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49542473..49542535mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49542634..49542710mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49542833..49542917mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49543113..49543239mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49543332..49543430mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49543567..49543604mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49543690..49543767mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49543892..49543969mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49544088..49544220mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49544921..49544934mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49545041..49545057mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49545421..49545544mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49545661..49545769mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49546324..49546407mRNAPaHa12g17580.1
exon
part_ofPaHa12g17580.1-exon-12-1787993825:49546489..49546598mRNAPaHa12g17580.1
