Feature identity
- Identifier
- PaHa12g17350.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,644 bp
- Genomic location
- 12:49,182,729–49,185,150
- Strand
- +
Hass · mRNA
PaHa12g17350.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,644
- bp
- 12:49,182,729–49,185,150
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g17350
- eggNOG
- Preferred name: WRKY6 | Seed ortholog: 337451.A0A3S3NX08 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Ea-12, WRKY@3193|Uq-17, WRKY@3398|Ats-27, WRKY@35493|In-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0016036 cellular response to phosphate starvation; GO:0045892 negative regulation of DNA-templated transcription; GO:0080169 cellular response to boron-containing substance deprivation; GO:1900057 positive regulation of leaf senescence
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g17350.1-protein
derives_frommRNAPaHa12g17350.1
mRNAPaHa12g17350.1
part_ofgenePaHa12g17350
CDS
part_ofPaHa12g17350.1-CDS-12-1787993825:49182729..49183022mRNAPaHa12g17350.1
CDS
part_ofPaHa12g17350.1-CDS-12-1787993825:49183121..49183213mRNAPaHa12g17350.1
CDS
part_ofPaHa12g17350.1-CDS-12-1787993825:49183309..49183470mRNAPaHa12g17350.1
CDS
part_ofPaHa12g17350.1-CDS-12-1787993825:49183575..49183955mRNAPaHa12g17350.1
CDS
part_ofPaHa12g17350.1-CDS-12-1787993825:49184320..49184433mRNAPaHa12g17350.1
CDS
part_ofPaHa12g17350.1-CDS-12-1787993825:49184551..49185150mRNAPaHa12g17350.1
exon
part_ofPaHa12g17350.1-exon-12-1787993825:49182729..49183022mRNAPaHa12g17350.1
exon
part_ofPaHa12g17350.1-exon-12-1787993825:49183121..49183213mRNAPaHa12g17350.1
exon
part_ofPaHa12g17350.1-exon-12-1787993825:49183309..49183470mRNAPaHa12g17350.1
exon
part_ofPaHa12g17350.1-exon-12-1787993825:49183575..49183955mRNAPaHa12g17350.1
exon
part_ofPaHa12g17350.1-exon-12-1787993825:49184320..49184433mRNAPaHa12g17350.1
exon
part_ofPaHa12g17350.1-exon-12-1787993825:49184551..49185150mRNAPaHa12g17350.1
