Feature identity
- Identifier
- PaHa12g16840.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,788 bp
- Genomic location
- 12:48,521,400–48,527,461
- Strand
- +
Hass · mRNA
PaHa12g16840.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,788
- bp
- 12:48,521,400–48,527,461
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g16840
- eggNOG
- Preferred name: LAC1 | Seed ortholog: 337451.A0A3S3PRA4 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@2759|v-6, Cu-oxidase@3193|AuY-20, Cu-oxidase@3398|BPp-21, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@131567|z-6, Cu-oxidase_2@2759|HU-12, Cu-oxidase_2@3193|AFx-20, Cu-oxidase_2@3398|AUN-21, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@2759|Av-9, Cu-oxidase_3@3193|HzF-33, Cu-oxidase_3@58023|Iqa-34
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0048226 Casparian strip; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane
- KEGG
- EC: ec:1.10.3.2 | KO: K05909 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g16840.1-protein
derives_frommRNAPaHa12g16840.1
mRNAPaHa12g16840.1
part_ofgenePaHa12g16840
CDS
part_ofPaHa12g16840.1-CDS-12-1787993825:48521400..48521531mRNAPaHa12g16840.1
CDS
part_ofPaHa12g16840.1-CDS-12-1787993825:48521667..48521818mRNAPaHa12g16840.1
CDS
part_ofPaHa12g16840.1-CDS-12-1787993825:48523778..48524019mRNAPaHa12g16840.1
CDS
part_ofPaHa12g16840.1-CDS-12-1787993825:48526090..48526218mRNAPaHa12g16840.1
CDS
part_ofPaHa12g16840.1-CDS-12-1787993825:48526329..48527461mRNAPaHa12g16840.1
exon
part_ofPaHa12g16840.1-exon-12-1787993825:48521400..48521531mRNAPaHa12g16840.1
exon
part_ofPaHa12g16840.1-exon-12-1787993825:48521667..48521818mRNAPaHa12g16840.1
exon
part_ofPaHa12g16840.1-exon-12-1787993825:48523778..48524019mRNAPaHa12g16840.1
exon
part_ofPaHa12g16840.1-exon-12-1787993825:48526090..48526218mRNAPaHa12g16840.1
exon
part_ofPaHa12g16840.1-exon-12-1787993825:48526329..48527461mRNAPaHa12g16840.1
