Anise · gene

Chr01.g07978

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

94,323
bp
Chr01:77,228,820–77,323,142
genomic location
Record overview

Feature identity

Identifier
Chr01.g07978
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
94,323 bp
Genomic location
Chr01:77,228,820–77,323,142
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010266718.1,J,[polyribonucleotide nucleotidyltransferase]
Gene Ontology
polyribonucleotide nucleotidyltransferase | GO:0006109//regulation of carbohydrate metabolic process; GO:0006139//nucleobase-containing compound metabolic process; GO:0006396//RNA processing; GO:0006401//RNA catabolic process; GO:0006629//lipid metabolic process; GO:0006720//isoprenoid metabolic process; GO:0006721//terpenoid metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006778//porphyrin-containing compound metabolic process; GO:0006779//porphyrin-containing compound biosynthetic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0007154//cell communication; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009058//biosynthetic process; GO:0009267//cellular response to starvation; GO:0009605//response to external stimulus; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0009991//response to extracellular stimulus; GO:0010322//regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; GO:0010323//negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway; GO:0010467//gene expression; GO:0010563//negative regulation of phosphorus metabolic process; GO:0010565//regulation of cellular ketone metabolic process; GO:0010675//regulation of cellular carbohydrate metabolic process; GO:0010677//negative regulation of cellular carbohydrate metabolic process; GO:0015994//chlorophyll metabolic process; GO:0015995//chlorophyll biosynthetic process; GO:0016036//cellular response to phosphate starvation; GO:0016070//RNA metabolic process; GO:0016108//tetraterpenoid metabolic process; GO:0016109//tetraterpenoid biosynthetic process; GO:0016114//terpenoid biosynthetic process; GO:0016116//carotenoid metabolic process; GO:0016117//carotenoid biosynthetic process; GO:0016119//carotene metabolic process; GO:0016120//carotene biosynthetic process; GO:0016122//xanthophyll metabolic process; GO:0016123//xanthophyll biosynthetic process; GO:0018130//heterocycle biosynthetic process; GO:0019216//regulation of lipid metabolic process; GO:0019220//regulation of phosphate metabolic process; GO:0019222//regulation of metabolic process; GO:0019438//aromatic compound biosynthetic process; GO:0019439//aromatic compound catabolic process; GO:0019747//regulation of isoprenoid metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0031425//chloroplast RNA processing; GO:0031667//response to nutrient levels; GO:0031668//cellular response to extracellular stimulus; GO:0031669//cellular response to nutrient levels; GO:0033013//tetrapyrrole metabolic process; GO:0033014//tetrapyrrole biosynthetic process; GO:0033554//cellular response to stress; GO:0034641//cellular nitrogen compound metabolic process; GO:0034655//nucleobase-containing compound catabolic process; GO:0042214//terpene metabolic process; GO:0042440//pigment metabolic process; GO:0042594//response to starvation; GO:0043170//macromolecule metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044270//cellular nitrogen compound catabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0045827//negative regulation of isoprenoid metabolic process; GO:0045833//negative regulation of lipid metabolic process; GO:0045912//negative regulation of carbohydrate metabolic process; GO:0045936//negative regulation of phosphate metabolic process; GO:0046148//pigment biosynthetic process; GO:0046246//terpene biosynthetic process; GO:0046483//heterocycle metabolic process; GO:0046700//heterocycle catabolic process; GO:0046890//regulation of lipid biosynthetic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051055//negative regulation of lipid biosynthetic process; GO:0051174//regulation of phosphorus metabolic process; GO:0051186//cofactor metabolic process; GO:0051188//cofactor biosynthetic process; GO:0051716//cellular response to stimulus; GO:0065007//biological regulation; GO:0071071//regulation of phospholipid biosynthetic process; GO:0071072//negative regulation of phospholipid biosynthetic process; GO:0071496//cellular response to external stimulus; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:0090304//nucleic acid metabolic process; GO:0090305//nucleic acid phosphodiester bond hydrolysis; GO:0090501//RNA phosphodiester bond hydrolysis; GO:0090503//RNA phosphodiester bond hydrolysis, exonucleolytic; GO:1901360//organic cyclic compound metabolic process; GO:1901361//organic cyclic compound catabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901564//organonitrogen compound metabolic process; GO:1901566//organonitrogen compound biosynthetic process; GO:1901575//organic substance catabolic process; GO:1901576//organic substance biosynthetic process; GO:1903725//regulation of phospholipid metabolic process; GO:1903726//negative regulation of phospholipid metabolic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009532//plastid stroma; GO:0009536//plastid; GO:0009570//chloroplast stroma; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044434//chloroplast part; GO:0044435//plastid part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part | GO:0000175//3'-5'-exoribonuclease activity; GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004518//nuclease activity; GO:0004527//exonuclease activity; GO:0004532//exoribonuclease activity; GO:0004540//ribonuclease activity; GO:0004654//polyribonucleotide nucleotidyltransferase activity; GO:0008408//3'-5' exonuclease activity; GO:0016740//transferase activity; GO:0016772//transferase activity, transferring phosphorus-containing groups; GO:0016779//nucleotidyltransferase activity; GO:0016787//hydrolase activity; GO:0016788//hydrolase activity, acting on ester bonds; GO:0016796//exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters; GO:0016896//exoribonuclease activity, producing 5'-phosphomonoesters
KEGG
K00962 | pnp, PNPT1
NR
RWR80391.1 putative polyribonucleotide nucleotidyltransferase 1, chloroplastic [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q69LE7.1 RecName: Full=Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; AltName: Full=Polynucleotide phosphorylase 1; Short=PNPase 1; Flags: Precursor [Oryza sativa Japonica Group]
Biological context

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