Anise · gene

Chr01.g08124

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

14,290
bp
Chr01:79,492,688–79,506,977
genomic location
Record overview

Feature identity

Identifier
Chr01.g08124
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
14,290 bp
Genomic location
Chr01:79,492,688–79,506,977
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010252066.1,K,[Transcription factor]
Gene Ontology
Transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0048471//perinuclear region of cytoplasm; GO:0070013//intracellular organelle lumen | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0043621//protein self-association
NR
RWR80479.1 transcription factor RF2b-like protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q6S4P4.2 RecName: Full=Transcription factor RF2b [Oryza sativa Japonica Group]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.