Anise · gene

Chr01.g08870

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,527
bp
Chr01:88,734,919–88,738,445
genomic location
Record overview

Feature identity

Identifier
Chr01.g08870
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
3,527 bp
Genomic location
Chr01:88,734,919–88,738,445
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010278165.1,K,[Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations]
Gene Ontology
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations | GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009414//response to water deprivation; GO:0009415//response to water; GO:0009605//response to external stimulus; GO:0009606//tropism; GO:0009611//response to wounding; GO:0009628//response to abiotic stimulus; GO:0009629//response to gravity; GO:0009630//gravitropism; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009734//auxin-activated signaling pathway; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010015//root morphogenesis; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010101//post-embryonic root morphogenesis; GO:0010102//lateral root morphogenesis; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022622//root system development; GO:0023052//signaling; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0042221//response to chemical; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0048364//root development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048527//lateral root development; GO:0048528//post-embryonic root development; GO:0048731//system development; GO:0048831//regulation of shoot system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051094//positive regulation of developmental process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051240//positive regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071365//cellular response to auxin stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0080090//regulation of primary metabolic process; GO:0090696//post-embryonic plant organ development; GO:0090697//post-embryonic plant organ morphogenesis; GO:0090698//post-embryonic plant morphogenesis; GO:0099402//plant organ development; GO:1900055//regulation of leaf senescence; GO:1900057//positive regulation of leaf senescence; GO:1901700//response to oxygen-containing compound; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:1905392//plant organ morphogenesis; GO:1905623//positive regulation of leaf development; GO:2000024//regulation of leaf development; GO:2000026//regulation of multicellular organismal development; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0042802//identical protein binding
KEGG
K14484 | IAA
NR
RWR80956.1 auxin-responsive protein IAA30 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O24407.1 RecName: Full=Auxin-responsive protein IAA16; AltName: Full=Indoleacetic acid-induced protein 16 [Arabidopsis thaliana]
Biological context

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