Feature identity
- Identifier
- PaHa12g16190.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 978 bp
- Genomic location
- 12:47,684,771–47,692,971
- Strand
- −
Hass · mRNA
PaHa12g16190.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 978
- bp
- 12:47,684,771–47,692,971
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g16190
- eggNOG
- Preferred name: SMB | Seed ortholog: 337451.A0A443PED4 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|AbD-20, NAM@35493|AE-6, NAM@58023|AGC-18
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009834 plant-type secondary cell wall biogenesis; GO:0048829 root cap development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g16190.1-protein
derives_frommRNAPaHa12g16190.1
mRNAPaHa12g16190.1
part_ofgenePaHa12g16190
CDS
part_ofPaHa12g16190.1-CDS-12-1787993825:47684771..47685283mRNAPaHa12g16190.1
CDS
part_ofPaHa12g16190.1-CDS-12-1787993825:47692199..47692470mRNAPaHa12g16190.1
CDS
part_ofPaHa12g16190.1-CDS-12-1787993825:47692779..47692971mRNAPaHa12g16190.1
exon
part_ofPaHa12g16190.1-exon-12-1787993825:47684771..47685283mRNAPaHa12g16190.1
exon
part_ofPaHa12g16190.1-exon-12-1787993825:47692199..47692470mRNAPaHa12g16190.1
exon
part_ofPaHa12g16190.1-exon-12-1787993825:47692779..47692971mRNAPaHa12g16190.1
