Anise · gene

Chr02.g10866

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

9,292
bp
Chr02:9,840,346–9,849,637
genomic location
Record overview

Feature identity

Identifier
Chr02.g10866
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
9,292 bp
Genomic location
Chr02:9,840,346–9,849,637
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
13333.ERN02228,O,[Belongs to the AAA ATPase family]
Gene Ontology
Belongs to the AAA ATPase family | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006508//proteolysis; GO:0006511//ubiquitin-dependent protein catabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009894//regulation of catabolic process; GO:0009896//positive regulation of catabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010498//proteasomal protein catabolic process; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0019941//modification-dependent protein catabolic process; GO:0030162//regulation of proteolysis; GO:0030163//protein catabolic process; GO:0030433//ubiquitin-dependent ERAD pathway; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0031329//regulation of cellular catabolic process; GO:0031331//positive regulation of cellular catabolic process; GO:0031334//positive regulation of protein complex assembly; GO:0032268//regulation of cellular protein metabolic process; GO:0032270//positive regulation of cellular protein metabolic process; GO:0033554//cellular response to stress; GO:0034976//response to endoplasmic reticulum stress; GO:0036503//ERAD pathway; GO:0042176//regulation of protein catabolic process; GO:0042221//response to chemical; GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170//macromolecule metabolic process; GO:0043254//regulation of protein complex assembly; GO:0043632//modification-dependent macromolecule catabolic process; GO:0044087//regulation of cellular component biogenesis; GO:0044089//positive regulation of cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044257//cellular protein catabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044267//cellular protein metabolic process; GO:0045732//positive regulation of protein catabolic process; GO:0045862//positive regulation of proteolysis; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045898//regulation of RNA polymerase II transcriptional preinitiation complex assembly; GO:0045899//positive regulation of RNA polymerase II transcriptional preinitiation complex assembly; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045944//positive regulation of transcription from RNA polymerase II promoter; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051128//regulation of cellular component organization; GO:0051130//positive regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051246//regulation of protein metabolic process; GO:0051247//positive regulation of protein metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051603//proteolysis involved in cellular protein catabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0060260//regulation of transcription initiation from RNA polymerase II promoter; GO:0060261//positive regulation of transcription initiation from RNA polymerase II promoter; GO:0061136//regulation of proteasomal protein catabolic process; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901565//organonitrogen compound catabolic process; GO:1901575//organic substance catabolic process; GO:1901698//response to nitrogen compound; GO:1901800//positive regulation of proteasomal protein catabolic process; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903050//regulation of proteolysis involved in cellular protein catabolic process; GO:1903052//positive regulation of proteolysis involved in cellular protein catabolic process; GO:1903362//regulation of cellular protein catabolic process; GO:1903364//positive regulation of cellular protein catabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000142//regulation of DNA-templated transcription, initiation; GO:2000144//positive regulation of DNA-templated transcription, initiation; GO:2001141//regulation of RNA biosynthetic process | GO:0000502//proteasome complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0005886//plasma membrane; GO:0016020//membrane; GO:0031595//nuclear proteasome complex; GO:0031597//cytosolic proteasome complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044445//cytosolic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0071944//cell periphery; GO:1902494//catalytic complex; GO:1905368//peptidase complex; GO:1905369//endopeptidase complex | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0016462//pyrophosphatase activity; GO:0016787//hydrolase activity; GO:0016817//hydrolase activity, acting on acid anhydrides; GO:0016818//hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0016887//ATPase activity; GO:0017025//TBP-class protein binding; GO:0017111//nucleoside-triphosphatase activity; GO:0036402//proteasome-activating ATPase activity; GO:0042623//ATPase activity, coupled
KEGG
K03066 | PSMC5, RPT6
NR
RWR72376.1 26S protease regulatory subunit 8 A [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9C5U3.1 RecName: Full=26S proteasome regulatory subunit 8 homolog A; AltName: Full=26S proteasome AAA-ATPase subunit RPT6a; AltName: Full=26S proteasome subunit 8 homolog A; AltName: Full=Regulatory particle triple-A ATPase subunit 6a [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.