Feature identity
- Identifier
- PaHa12g13160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 411 bp
- Genomic location
- 12:41,264,569–41,267,312
- Strand
- −
Hass · mRNA
PaHa12g13160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 411
- bp
- 12:41,264,569–41,267,312
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g13160
- eggNOG
- Preferred name: WSD1 | Seed ortholog: 337451.A0A3S4PYH7 | COG: S | eggNOG OG: WES_acyltransf@35493|I-4, WES_acyltransf@58023|X-6, WS_DGAT_C@131567|A-1, WS_DGAT_C@58023|r-8
- Gene Ontology
- GO:0000139 Golgi membrane; GO:0004144 diacylglycerol O-acyltransferase activity; GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005886 plasma membrane; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010025 wax biosynthetic process; GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity; GO:0048441 petal development; GO:0048446 petal morphogenesis
- KEGG
- EC: ec:2.3.1.20, ec:2.3.1.75 | KO: K15406 | Pathway: 00073, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g13160.1-protein
derives_frommRNAPaHa12g13160.1
mRNAPaHa12g13160.1
part_ofgenePaHa12g13160
CDS
part_ofPaHa12g13160.1-CDS-12-1787993825:41264569..41264718mRNAPaHa12g13160.1
CDS
part_ofPaHa12g13160.1-CDS-12-1787993825:41265911..41266048mRNAPaHa12g13160.1
CDS
part_ofPaHa12g13160.1-CDS-12-1787993825:41267190..41267312mRNAPaHa12g13160.1
exon
part_ofPaHa12g13160.1-exon-12-1787993825:41264569..41264718mRNAPaHa12g13160.1
exon
part_ofPaHa12g13160.1-exon-12-1787993825:41265911..41266048mRNAPaHa12g13160.1
exon
part_ofPaHa12g13160.1-exon-12-1787993825:41267190..41267312mRNAPaHa12g13160.1
