Feature identity
- Identifier
- PaHa12g12950.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,001 bp
- Genomic location
- 12:40,947,773–40,960,189
- Strand
- −
Hass · mRNA
PaHa12g12950.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,001
- bp
- 12:40,947,773–40,960,189
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g12950
- eggNOG
- Preferred name: LOC110786416 | Seed ortholog: 337451.A0A3S3NJN5 | eggNOG OG: AMP-binding|6RGWO0@131567, AMP-binding|6RGWO0@1437183, AMP-binding|6RGWO0@3193, AMP-binding|6RGWO0@3398
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0005794 Golgi apparatus; GO:0005886 plasma membrane; GO:0006631 fatty acid metabolic process; GO:0006633 fatty acid biosynthetic process; GO:0009507 chloroplast; GO:0009556 microsporogenesis; GO:0048653 anther development; GO:0080024 indolebutyric acid metabolic process
- KEGG
- EC: ec:6.2.1.3 | KO: K01897 | Pathway: 00061, 00071, 01100, 01212, 04146 | Module: M00086 | BRITE: 00001, 01000, 01004, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g12950.1-protein
derives_frommRNAPaHa12g12950.1
mRNAPaHa12g12950.1
part_ofgenePaHa12g12950
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40947773..40947817mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40948538..40948657mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40948771..40948953mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40949118..40949257mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40949794..40950042mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40950476..40950593mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40950701..40950776mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40952141..40952207mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40953027..40953114mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40953219..40953329mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40953454..40953621mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40955469..40955563mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40955643..40955682mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40956958..40957034mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40957351..40957399mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40957554..40957610mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40959231..40959320mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40959440..40959503mRNAPaHa12g12950.1
CDS
part_ofPaHa12g12950.1-CDS-12-1787993825:40960026..40960189mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40947773..40947817mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40948538..40948657mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40948771..40948953mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40949118..40949257mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40949794..40950042mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40950476..40950593mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40950701..40950776mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40952141..40952207mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40953027..40953114mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40953219..40953329mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40953454..40953621mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40955469..40955563mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40955643..40955682mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40956958..40957034mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40957351..40957399mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40957554..40957610mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40959231..40959320mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40959440..40959503mRNAPaHa12g12950.1
exon
part_ofPaHa12g12950.1-exon-12-1787993825:40960026..40960189mRNAPaHa12g12950.1
