Anise · gene

Chr02.g19518

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,250
bp
Chr02:99,511,724–99,514,973
genomic location
Record overview

Feature identity

Identifier
Chr02.g19518
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
3,250 bp
Genomic location
Chr02:99,511,724–99,514,973
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
29760.VIT_02s0033g00450.t01,K,[Transcription factor]
Gene Ontology
Transcription factor | GO:0000302//response to reactive oxygen species; GO:0000303//response to superoxide; GO:0000305//response to oxygen radical; GO:0001101//response to acid chemical; GO:0002239//response to oomycetes; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006801//superoxide metabolic process; GO:0006950//response to stress; GO:0006970//response to osmotic stress; GO:0006979//response to oxidative stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009628//response to abiotic stimulus; GO:0009636//response to toxic substance; GO:0009651//response to salt stress; GO:0009718//anthocyanin-containing compound biosynthetic process; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009743//response to carbohydrate; GO:0009744//response to sucrose; GO:0009745//sucrose mediated signaling; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009756//carbohydrate mediated signaling; GO:0009812//flavonoid metabolic process; GO:0009813//flavonoid biosynthetic process; GO:0009867//jasmonic acid mediated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009962//regulation of flavonoid biosynthetic process; GO:0009963//positive regulation of flavonoid biosynthetic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010182//sugar mediated signaling pathway; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019430//removal of superoxide radicals; GO:0023052//signaling; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031537//regulation of anthocyanin metabolic process; GO:0031539//positive regulation of anthocyanin metabolic process; GO:0031540//regulation of anthocyanin biosynthetic process; GO:0031542//positive regulation of anthocyanin biosynthetic process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0033554//cellular response to stress; GO:0034285//response to disaccharide; GO:0034599//cellular response to oxidative stress; GO:0034614//cellular response to reactive oxygen species; GO:0042221//response to chemical; GO:0042440//pigment metabolic process; GO:0043207//response to external biotic stimulus; GO:0044237//cellular metabolic process; GO:0046148//pigment biosynthetic process; GO:0046283//anthocyanin-containing compound metabolic process; GO:0048518//positive regulation of biological process; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071229//cellular response to acid chemical; GO:0071310//cellular response to organic substance; GO:0071322//cellular response to carbohydrate stimulus; GO:0071324//cellular response to disaccharide stimulus; GO:0071329//cellular response to sucrose stimulus; GO:0071395//cellular response to jasmonic acid stimulus; GO:0071450//cellular response to oxygen radical; GO:0071451//cellular response to superoxide; GO:0071495//cellular response to endogenous stimulus; GO:0071704//organic substance metabolic process; GO:0072593//reactive oxygen species metabolic process; GO:0080090//regulation of primary metabolic process; GO:0080167//response to karrikin; GO:0097237//cellular response to toxic substance; GO:0098754//detoxification; GO:0098869//cellular oxidant detoxification; GO:1901576//organic substance biosynthetic process; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1903506//regulation of nucleic acid-templated transcription; GO:1990748//cellular detoxification; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0000981//RNA polymerase II transcription factor activity, sequence-specific DNA binding; GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0001067//regulatory region nucleic acid binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001134//transcription factor activity, transcription factor recruiting; GO:0001135//transcription factor activity, RNA polymerase II transcription factor recruiting; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09422 | MYBP
NR
RWR75028.1 transcription factor MYB1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
A0A2R6S148.1 RecName: Full=Transcription factor MYB1; AltName: Full=Myb-related protein 1 [Actinidia chinensis var. chinensis]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.