Chr03.g20742

Functional evidence

eggNOG

4432.XP_010250171.1,A,[pre-mRNA-processing-splicing factor]

Gene Ontology

pre-mRNA-processing-splicing factor | GO:0000244//spliceosomal tri-snRNP complex assembly; GO:0000375//RNA splicing, via transesterification reactions; GO:0000377//RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0000387//spliceosomal snRNP assembly; GO:0000398//mRNA splicing, via spliceosome; GO:0002237//response to molecule of bacterial origin; GO:0006139//nucleobase-containing compound metabolic process; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008380//RNA splicing; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009617//response to bacterium; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010467//gene expression; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0022607//cellular component assembly; GO:0022613//ribonucleoprotein complex biogenesis; GO:0022618//ribonucleoprotein complex assembly; GO:0032496//response to lipopolysaccharide; GO:0033993//response to lipid; GO:0034097//response to cytokine; GO:0034612//response to tumor necrosis factor; GO:0034622//cellular macromolecular complex assembly; GO:0034641//cellular nitrogen compound metabolic process; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043207//response to external biotic stimulus; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0046483//heterocycle metabolic process; GO:0050896//response to stimulus; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0051716//cellular response to stimulus; GO:0065003//macromolecular complex assembly; GO:0070887//cellular response to chemical stimulus; GO:0071216//cellular response to biotic stimulus; GO:0071219//cellular response to molecule of bacterial origin; GO:0071222//cellular response to lipopolysaccharide; GO:0071310//cellular response to organic substance; GO:0071345//cellular response to cytokine stimulus; GO:0071356//cellular response to tumor necrosis factor; GO:0071396//cellular response to lipid; GO:0071704//organic substance metabolic process; GO:0071826//ribonucleoprotein complex subunit organization; GO:0071840//cellular component organization or biogenesis; GO:0090304//nucleic acid metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005681//spliceosomal complex; GO:0005682//U5 snRNP; GO:0005684//U2-type spliceosomal complex; GO:0030532//small nuclear ribonucleoprotein complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0046540//U4/U6 x U5 tri-snRNP complex; GO:0071005//U2-type precatalytic spliceosome; GO:0071007//U2-type catalytic step 2 spliceosome; GO:0071011//precatalytic spliceosome; GO:0071013//catalytic step 2 spliceosome; GO:0097525//spliceosomal snRNP complex; GO:0097526//spliceosomal tri-snRNP complex; GO:1902494//catalytic complex; GO:1990904//ribonucleoprotein complex | GO:0000386//second spliceosomal transesterification activity; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003824//catalytic activity; GO:0005488//binding; GO:0005515//protein binding; GO:0017069//snRNA binding; GO:0017070//U6 snRNA binding; GO:0030619//U1 snRNA binding; GO:0030620//U2 snRNA binding; GO:0030623//U5 snRNA binding; GO:0031593//polyubiquitin binding; GO:0036002//pre-mRNA binding; GO:0070530//K63-linked polyubiquitin binding; GO:0097157//pre-mRNA intronic binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding

KEGG

K12856 | PRPF8, PRP8

NR

RWR75687.1 pre-mRNA-processing-splicing factor 8A [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

Q9SSD2.1 RecName: Full=Pre-mRNA-processing-splicing factor 8A; AltName: Full=PRP8 homolog A; Short=AtPRP8A; AltName: Full=Protein ABNORMAL SUSPENSOR 2; AltName: Full=Protein EMBRYO DEFECTIVE 14; AltName: Full=Protein EMBRYO DEFECTIVE 177; AltName: Full=Protein EMBRYO DEFECTIVE 33; AltName: Full=Protein SUPPRESSOR OF OVEREXPRESSED FCA 81 [Arabidopsis thaliana]