Feature identity
- Identifier
- PaHa12g12030.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,185 bp
- Genomic location
- 12:39,634,480–39,642,835
- Strand
- −
Hass · mRNA
PaHa12g12030.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,185
- bp
- 12:39,634,480–39,642,835
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g12030
- eggNOG
- Preferred name: PEX12 | Seed ortholog: 337451.A0A443Q0K7 | COG: S | eggNOG OG: Pex2_Pex12@131567|A-1*, Pex2_Pex12@2759|C-2
- Gene Ontology
- GO:0004842 ubiquitin-protein transferase activity; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0006513 protein monoubiquitination; GO:0006635 fatty acid beta-oxidation; GO:0007031 peroxisome organization; GO:0016558 protein import into peroxisome matrix; GO:0048598 embryonic morphogenesis
- KEGG
- KO: K13345 | Pathway: 04146 | BRITE: 00001, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g12030.1-protein
derives_frommRNAPaHa12g12030.1
mRNAPaHa12g12030.1
part_ofgenePaHa12g12030
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39634480..39634551mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39634644..39634781mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39635303..39635389mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39636990..39637076mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39637507..39637581mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39637897..39638006mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39639826..39640078mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39640687..39640835mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39641316..39641421mRNAPaHa12g12030.1
CDS
part_ofPaHa12g12030.1-CDS-12-1787993825:39642728..39642835mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39634480..39634551mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39634644..39634781mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39635303..39635389mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39636990..39637076mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39637507..39637581mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39637897..39638006mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39639826..39640078mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39640687..39640835mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39641316..39641421mRNAPaHa12g12030.1
exon
part_ofPaHa12g12030.1-exon-12-1787993825:39642728..39642835mRNAPaHa12g12030.1
