Anise · gene

Chr03.g26139

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

34,119
bp
Chr03:58,437,906–58,472,024
genomic location
Record overview

Feature identity

Identifier
Chr03.g26139
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
34,119 bp
Genomic location
Chr03:58,437,906–58,472,024
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008795107.1,K,[Breast carcinoma amplified sequence 3]
Gene Ontology
Breast carcinoma amplified sequence 3 | GO:0000226//microtubule cytoskeleton organization; GO:0001952//regulation of cell-matrix adhesion; GO:0001953//negative regulation of cell-matrix adhesion; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006810//transport; GO:0006950//response to stress; GO:0006996//organelle organization; GO:0007010//cytoskeleton organization; GO:0007017//microtubule-based process; GO:0007030//Golgi organization; GO:0007162//negative regulation of cell adhesion; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009605//response to external stimulus; GO:0009653//anatomical structure morphogenesis; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0009991//response to extracellular stimulus; GO:0010256//endomembrane system organization; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010594//regulation of endothelial cell migration; GO:0010595//positive regulation of endothelial cell migration; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0010632//regulation of epithelial cell migration; GO:0010634//positive regulation of epithelial cell migration; GO:0010638//positive regulation of organelle organization; GO:0010810//regulation of cell-substrate adhesion; GO:0010812//negative regulation of cell-substrate adhesion; GO:0016043//cellular component organization; GO:0016192//vesicle-mediated transport; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0030155//regulation of cell adhesion; GO:0030334//regulation of cell migration; GO:0030335//positive regulation of cell migration; GO:0031023//microtubule organizing center organization; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0031344//regulation of cell projection organization; GO:0031346//positive regulation of cell projection organization; GO:0031667//response to nutrient levels; GO:0032386//regulation of intracellular transport; GO:0032388//positive regulation of intracellular transport; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032878//regulation of establishment or maintenance of cell polarity; GO:0032879//regulation of localization; GO:0032880//regulation of protein localization; GO:0032956//regulation of actin cytoskeleton organization; GO:0032970//regulation of actin filament-based process; GO:0033043//regulation of organelle organization; GO:0033157//regulation of intracellular protein transport; GO:0034260//negative regulation of GTPase activity; GO:0035148//tube formation; GO:0035239//tube morphogenesis; GO:0035295//tube development; GO:0040012//regulation of locomotion; GO:0040017//positive regulation of locomotion; GO:0042221//response to chemical; GO:0042594//response to starvation; GO:0043085//positive regulation of catalytic activity; GO:0043086//negative regulation of catalytic activity; GO:0043087//regulation of GTPase activity; GO:0043547//positive regulation of GTPase activity; GO:0043627//response to estrogen; GO:0044087//regulation of cellular component biogenesis; GO:0044089//positive regulation of cellular component biogenesis; GO:0044092//negative regulation of molecular function; GO:0044093//positive regulation of molecular function; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045944//positive regulation of transcription from RNA polymerase II promoter; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048646//anatomical structure formation involved in morphogenesis; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050790//regulation of catalytic activity; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051049//regulation of transport; GO:0051050//positive regulation of transport; GO:0051128//regulation of cellular component organization; GO:0051129//negative regulation of cellular component organization; GO:0051130//positive regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051179//localization; GO:0051222//positive regulation of protein transport; GO:0051223//regulation of protein transport; GO:0051234//establishment of localization; GO:0051239//regulation of multicellular organismal process; GO:0051240//positive regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051270//regulation of cellular component movement; GO:0051272//positive regulation of cellular component movement; GO:0051336//regulation of hydrolase activity; GO:0051345//positive regulation of hydrolase activity; GO:0051346//negative regulation of hydrolase activity; GO:0051489//regulation of filopodium assembly; GO:0051491//positive regulation of filopodium assembly; GO:0051493//regulation of cytoskeleton organization; GO:0051495//positive regulation of cytoskeleton organization; GO:0051716//cellular response to stimulus; GO:0051893//regulation of focal adhesion assembly; GO:0051895//negative regulation of focal adhesion assembly; GO:0060255//regulation of macromolecule metabolic process; GO:0060341//regulation of cellular localization; GO:0060491//regulation of cell projection assembly; GO:0065007//biological regulation; GO:0065009//regulation of molecular function; GO:0070201//regulation of establishment of protein localization; GO:0070887//cellular response to chemical stimulus; GO:0071391//cellular response to estrogen stimulus; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0090087//regulation of peptide transport; GO:0090109//regulation of cell-substrate junction assembly; GO:0090316//positive regulation of intracellular protein transport; GO:0090630//activation of GTPase activity; GO:1901888//regulation of cell junction assembly; GO:1901889//negative regulation of cell junction assembly; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903391//regulation of adherens junction organization; GO:1903392//negative regulation of adherens junction organization; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:1903827//regulation of cellular protein localization; GO:1903829//positive regulation of cellular protein localization; GO:1904951//positive regulation of establishment of protein localization; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000114//regulation of establishment of cell polarity; GO:2000145//regulation of cell motility; GO:2000147//positive regulation of cell motility; GO:2000249//regulation of actin cytoskeleton reorganization; GO:2000251//positive regulation of actin cytoskeleton reorganization; GO:2001141//regulation of RNA biosynthetic process | GO:0000785//chromatin; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005694//chromosome; GO:0005730//nucleolus; GO:0005737//cytoplasm; GO:0005856//cytoskeleton; GO:0005874//microtubule; GO:0005881//cytoplasmic microtubule; GO:0015630//microtubule cytoskeleton; GO:0031252//cell leading edge; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0035327//transcriptionally active chromatin; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044427//chromosomal part; GO:0044428//nuclear part; GO:0044430//cytoskeletal part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0045111//intermediate filament cytoskeleton; GO:0070013//intracellular organelle lumen; GO:0099080//supramolecular complex; GO:0099081//supramolecular polymer; GO:0099512//supramolecular fiber; GO:0099513//polymeric cytoskeletal fiber | GO:0003674//molecular_function; GO:0003682//chromatin binding; GO:0005102//receptor binding; GO:0005488//binding; GO:0005515//protein binding; GO:0008047//enzyme activator activity; GO:0008092//cytoskeletal protein binding; GO:0008134//transcription factor binding; GO:0010698//acetyltransferase activator activity; GO:0015631//tubulin binding; GO:0019899//enzyme binding; GO:0030234//enzyme regulator activity; GO:0035035//histone acetyltransferase binding; GO:0035257//nuclear hormone receptor binding; GO:0042393//histone binding; GO:0048487//beta-tubulin binding; GO:0051427//hormone receptor binding; GO:0098772//molecular function regulator
NR
RWR76612.1 autophagy-related protein 18h-like protein isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q8GUL1.1 RecName: Full=Autophagy-related protein 18g; Short=AtATG18g [Arabidopsis thaliana]
Biological context

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