Anise · gene

Chr03.g29209

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,481
bp
Chr03:93,948,001–93,954,481
genomic location
Record overview

Feature identity

Identifier
Chr03.g29209
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
6,481 bp
Genomic location
Chr03:93,948,001–93,954,481
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010270573.1,K,[Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs)]
Gene Ontology
Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) | GO:0006355//regulation of transcription, DNA-templated; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0009937//regulation of gibberellic acid mediated signaling pathway; GO:0009938//negative regulation of gibberellic acid mediated signaling pathway; GO:0009966//regulation of signal transduction; GO:0009968//negative regulation of signal transduction; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010646//regulation of cell communication; GO:0010648//negative regulation of cell communication; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023051//regulation of signaling; GO:0023057//negative regulation of signaling; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003680//AT DNA binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0043565//sequence-specific DNA binding; GO:0043621//protein self-association; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding
NR
RWR78308.1 AT-hook motif nuclear-localized protein 25 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9S7C9.1 RecName: Full=AT-hook motif nuclear-localized protein 27; AltName: Full=DNA-binding protein ESCAROLA; AltName: Full=Protein ORESARA 7 [Arabidopsis thaliana]
Biological context

Connected feature records

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